DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cbc and LOC1274845

DIOPT Version :10

Sequence 1:NP_610876.1 Gene:cbc / 36494 FlyBaseID:FBgn0033842 Length:423 Species:Drosophila melanogaster
Sequence 2:XP_314054.4 Gene:LOC1274845 / 1274845 VectorBaseID:AGAMI1_012224 Length:1064 Species:Anopheles gambiae


Alignment Length:298 Identity:71/298 - (23%)
Similarity:120/298 - (40%) Gaps:59/298 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 MVVGPMDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANVEEGFAKTA 177
            ||||....||||||:.|:|..::...|.|..|||:||..:.:..:::..::|.|......||...
Mosquito   719 MVVGGKSSGKSTLCQYLINRYIKQFGRVLLLDLDIGQPLLFVPETLSVSVLEEPILGVGCFANAQ 783

  Fly   178 PLVYH-FGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGSGYAHLLHAA 241
            |.... ||..:...:.::|...|..:    :|..|.:...:....||||.|:|.|.|        
Mosquito   784 PRQCKLFGSLNVVSSPLVYVQNVRSL----VQYCNEDPALQDIPWIINTMGYVVGFG-------- 836

  Fly   242 KAYGACAIFVLDQERLYNELLRDV-PKGVHVVLLPKSGGVVERSKELRHEARDQRIKEYFYGN-- 303
                         |.|...::|.: |..:..:..||:|          .::....:|...|.|  
Mosquito   837 -------------EELTMAIVRLLQPTDLIQLSFPKNG----------KKSSTPFLKPENYANQL 878

  Fly   304 TRAPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKT-------KVVAVTPTPALIHHV 361
            |......|:|.:..::::|.   :.|......||.:..|.|||       :.:|:....|.|...
Mosquito   879 TAELVNGFNFNILREEVQLQ---SAPANYRFHPIDVVYEPNKTSFLPPKRRTIAMMAQLARILSD 940

  Fly   362 LALSFAE------SVED-DVIGTNVAGFCCVTEVDMER 392
            .|.:|.:      .::| .:|.|   |..|.::..|:|
Mosquito   941 TAETFTDVKPHMAHLDDLSIIST---GEDCTSKEMMKR 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbcNP_610876.1 CLP1 11..412 CDD:227910 71/298 (24%)
CLP1_P 116..301 CDD:406878 43/186 (23%)
LOC1274845XP_314054.4 None

Return to query results.
Submit another query.