DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbc and CLP1

DIOPT Version :9

Sequence 1:NP_610876.1 Gene:cbc / 36494 FlyBaseID:FBgn0033842 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_006822.1 Gene:CLP1 / 10978 HGNCID:16999 Length:425 Species:Homo sapiens


Alignment Length:426 Identity:236/426 - (55%)
Similarity:313/426 - (73%) Gaps:9/426 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEDQGKD------YTLESDSELRFEIEQKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVA 59
            |.|:...|      :.||.::|||||:|...: |.:.|::|.||:|||||.:.|::.|..|||||
Human     1 MGEEANDDKKPTTKFELERETELRFEVEASQS-VQLELLTGMAEIFGTELTRNKKFTFDAGAKVA 64

  Fly    60 IFTYQGCVLHVSGKMDVCYISKETPMVQYVNCHAALEQFRMEAEEKDRYGPVAMVVGPMDVGKST 124
            :||:.||.:.:||:.:|.|:||:|||:.|:|.|.||||.|.:||:::..||..|||||.||||||
Human    65 VFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKST 129

  Fly   125 LCRILLNYAVRVGRRPLYADLDVGQGSIAISGSVATILIERPANVEEGFAKTAPLVYHFGHKSPS 189
            :||:|||||||:||||.|.:|||||||::|.|::..:.|||||:|||||:..||||||||..:|.
Human   130 VCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSIQAPLVYHFGSTTPG 194

  Fly   190 GNSVLYNAVVSKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGSGYAHLLHAAKAYGACAIFVLDQ 254
            .|..|||.:.|::|:|..|....|:|...||.:||||||||||||..|:|||.|:....:.||||
Human   195 TNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQ 259

  Fly   255 ERLYNELLRDVPKGVHVVLLPKSGGVVERSKELRHEARDQRIKEYFYGNTRAPFYPFSFEVKFQD 319
            |||||||.||:|..|..||||||||||||||:.|.|.||:||:||||| .|..|||.:|.|||.|
Human   260 ERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDERIREYFYG-FRGCFYPHAFNVKFSD 323

  Fly   320 LRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALIHHVLALSFAESVEDDVIGTNVAGFCC 384
            :::||:|||.:||||:|:||..|||:.|:|.|||...::||:|::|.||..|:::..|:||||..
Human   324 VKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIV 388

  Fly   385 VTEVDMERQAVMLLSPQPRPLPPNALLLWSELQFMD 420
            ||.||:|.|...:|||.|||||.|.||: .:::|||
Human   389 VTSVDLEHQVFTVLSPAPRPLPKNFLLI-MDIRFMD 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbcNP_610876.1 CLP1_N 9..102 CDD:293181 46/92 (50%)
CLP1 11..412 CDD:227910 229/400 (57%)
CLP1_P 116..301 CDD:293183 116/184 (63%)
Clp1 309..420 CDD:284274 57/110 (52%)
CLP1NP_006822.1 CLP1 14..423 CDD:227910 231/411 (56%)
CLP1_P 121..306 CDD:406878 116/184 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159396
Domainoid 1 1.000 249 1.000 Domainoid score I2138
eggNOG 1 0.900 - - E1_COG5623
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4975
Inparanoid 1 1.050 483 1.000 Inparanoid score I1466
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53868
OrthoDB 1 1.010 - - D370259at33208
OrthoFinder 1 1.000 - - FOG0003461
OrthoInspector 1 1.000 - - oto88474
orthoMCL 1 0.900 - - OOG6_101503
Panther 1 1.100 - - LDO PTHR12755
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R210
SonicParanoid 1 1.000 - - X3913
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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