DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Golgin97 and Golgin104

DIOPT Version :10

Sequence 1:NP_610875.1 Gene:Golgin97 / 36492 FlyBaseID:FBgn0086757 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_648879.1 Gene:Golgin104 / 39810 FlyBaseID:FBgn0036614 Length:776 Species:Drosophila melanogaster


Alignment Length:650 Identity:144/650 - (22%)
Similarity:253/650 - (38%) Gaps:188/650 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ATLKNKIKEETGDDVVQSANQRYPGNNNNNYRLRSRRVSINSNSADDVGGGGFYNESEQLCELRS 67
            |.::|....|.||.          |.::|:         |...:..||             ::::
  Fly    10 AEMENPASVENGDS----------GRDSNH---------IEGKAIGDV-------------DMKA 42

  Fly    68 QCNELTTKLSTVTQGLQQLQEEKTRVDKTNEILLESVRVAQTQKDIYCEEQEKIQNLQQIEIDKL 132
            ...|            |||:|...:.:...:.|.:       |.:...|:..|...|:|:.|::.
  Fly    43 DSIE------------QQLEESDVKTESNGDQLTD-------QDEGKIEQDLKAAVLEQVPIEEE 88

  Fly   133 KNLLSFRE---QESVDRMGLMRQQTQQIESLSEELERLRPIESVAEDLRDELEQLRHSTQQEKNL 194
            ...|.|::   ||.|..:.....|..|.:.|| .:..|..:|....:...:|||||.|..|:.|:
  Fly    89 GLSLRFKDLQAQEKVKELQQTPSQPPQNDILS-HVHCLAQLEEQRRNYEQQLEQLRTSNVQKDNM 152

  Fly   195 LTTTLAAVQEENRHL-------KKRMKIVEESRLESLGKLNSEQQVQALI---REHKLLEQHLEE 249
            :|    .:|.||..|       :|.|::..:.:..::.|...::::  ||   :|.:.:|:.|.|
  Fly   153 IT----LIQRENAILGKEKQACRKEMEMANKEKEATVIKFAMKEKL--LIDAKKEKEAVEKQLAE 211

  Fly   250 AHLQLSDIKGSWSGQNLALETQVSRLSKQVAEETTEKRK-------------ALKSR-------- 293
            |..::.::    |.:.||:..:.||::..:.|:..|.||             .|:|:        
  Fly   212 AKKEVKNV----STRFLAVSEEKSRMTYIIDEKCNEVRKYQRECEKYKTEMGHLESKLKYHINKL 272

  Fly   294 ----------DDAIESRKQVSFEL-EKAKDEIKQR-DDKVKLLEEEIDELSVALKECREENEQQV 346
                      :..:|..|....:| |||.:::|.. :....||:.||...:.||.:..:  |||.
  Fly   273 NIETEAKAVVERKLEEEKNAPNKLEEKANEKLKMEFEANTILLKHEITSKTEALDKLTK--EQQK 335

  Fly   347 LFERNKS-QNLETEVKDLKTRLTAADDRFSEYSSNAE-----------------QVAQKLRVQVT 393
            |...||. ||...|:.....:||...:|..|..::.|                 :..|.||.|.|
  Fly   336 LSAANKELQNQLQEITTEHNQLTEEYNRLRELHNSVEGSYSDELLNSAKLRGQLEELQLLRTQNT 400

  Fly   394 EKQEQL----------------DET-IMQLEIEREEKMTAILRNAEIAQSEDILRQQLRLERSEA 441
            ..:|:|                :|| :.||:::|:|.:|.   |.|:::....|:..:.|.:::|
  Fly   401 INEEKLMDQQKRVQKLEALVQDNETDLEQLKVKRQELLTI---NKEMSELIVQLQNDICLAKAKA 462

  Fly   442 SDLQERNNQLVRD----ISEARQTLQQVSSTAQDNADKLTEFERVQL--EIIEKNKTIKTLNQRL 500
            ..|...|..|.::    .::..|..||:|..|.:..:     ||:.|  .:.||.|..:...|:|
  Fly   463 QGLDAENKLLKQEKLTYDTKYNQLEQQLSLEASEKNE-----ERLLLAKHLSEKTKMYELTKQKL 522

  Fly   501 IDLK----------KTVQKELR-------------SAQISTDS------ESHPTTTPGHRISSSS 536
            .|::          .||.|||.             ...||..|      ..:||..|..|..|.|
  Fly   523 EDVQGDFEATQHKHATVLKELHRELNKYKRGITEPKTPISYCSNCQQAINGYPTENPQQRSHSRS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin97NP_610875.1 SMC_prok_B <71..465 CDD:274008 108/478 (23%)
Grip 553..598 CDD:197860
Golgin104NP_648879.1 SMC_prok_B 86..>373 CDD:274008 71/299 (24%)
Smc <314..>556 CDD:440809 61/251 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.