DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Golgin97 and golga1

DIOPT Version :10

Sequence 1:NP_610875.1 Gene:Golgin97 / 36492 FlyBaseID:FBgn0086757 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_957132.2 Gene:golga1 / 393811 ZFINID:ZDB-GENE-040426-1237 Length:862 Species:Danio rerio


Alignment Length:872 Identity:220/872 - (25%)
Similarity:358/872 - (41%) Gaps:287/872 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFATLKNKIKEETGDDVVQSANQRYPGNNNNNYRLRSRR--VSINSNSADDVGGGGFYNE---SE 60
            |||.||.|:.||.   .....:.|.|       |..|:.  .|:.::|.||....|..:.   |.
Zfish     1 MFAKLKKKLAEEA---ATAPRSGRIP-------RSMSKESITSVGADSGDDFASDGSSSRDDFSS 55

  Fly    61 QLCELRSQCNELTTKLSTVTQGLQQLQEEKTRVD---------------------KTNEI-LLES 103
            |:.....|..:|..|||...:.|:.:|:.|.:::                     :||.. :.|:
Zfish    56 QIQRRNDQIRKLEAKLSDYAEQLRLMQKTKEKLEIALEKYQDSSMRKLQDQNESFQTNRAKMAEA 120

  Fly   104 VRVAQTQKD------IYCEEQEK--------------------------IQNLQQIEIDKLKNLL 136
            :.:|..:||      :...||||                          ::..||.|:.|:|::|
Zfish   121 MSLALEKKDQEWMEKLASLEQEKLSLTSRLDEMTEQSLSLFQKRDDLDELEGFQQQELAKVKHML 185

  Fly   137 SFREQE---------------SVDRMGL---------------------MRQQTQQIESLSE--- 162
            ..||::               :..|:.|                     .:.|.|:.|.|||   
Zfish   186 LRREEQLNQREKELKLRGEELNTARLTLGKTQDKLYELGEEHEEICRTNSQLQAQRDELLSEKEE 250

  Fly   163 -------------ELERLRPIESVAED-----------------LRDELEQLRHSTQQEKNLLTT 197
                         ||::|  |:.|:||                 |:.|..:|:...:|.||.:..
Zfish   251 AERRVVDLERREQELQQL--IQQVSEDFQKAQSNAEALEKSMEHLQSEHNKLKLQHEQHKNKVAV 313

  Fly   198 T-------LAAVQEENRHLKKRMKIVEESRLESLGKLNSEQQVQALIREHKLLEQHLEEAHLQLS 255
            |       |:.:||:...|::|::          ...:.::.:|.|::|...|||.||||..:|.
Zfish   314 TEEERERILSDLQEKAASLERRLE----------ANFSQDEHLQELLKEKSSLEQRLEEARGELL 368

  Fly   256 DIKGSWSGQNLALETQVSRLSKQVAEETTEKRKALKSRDDAIES-RKQVSFELEKAKDEIKQRDD 319
            ..|.|.:....:||.||||.:..:.:..|    .:|.:||:.:: |::...::...:..:....:
Zfish   369 QEKTSHTTAVSSLEAQVSRQNASIIDLQT----LVKHKDDSSKAYRERTDAQISDLEQRLADCAE 429

  Fly   320 KVKLLEEEI-------DELSVALKECREENEQQVLFER----NKSQNLETEV----KDLKTRLTA 369
            |:|.|::::       |:|.:...|.||..:|||..:|    .|:..||.|:    :|.:|....
Zfish   430 KMKSLQQQLKDSQMHTDKLQMEWSEERERLQQQVSTQRQRGLEKTARLEEELLAVQRDRETEANK 494

  Fly   370 ADDRF--------------SEYSSNAEQVAQKL---RVQVTEKQ-------EQLDETIMQLEIER 410
            ..|..              .|..|..|.:..:|   |.:::.:|       :.|:||..|.|..:
Zfish   495 YQDNLRLLEEEKNSLLRSKGETDSTVESLTAELEQSRAEMSSRQTVSVEIAKALEETRKQREELQ 559

  Fly   411 EE--KMTAILRNA--EIAQ-SEDI---------LRQQLRLERSEASDLQ---------------E 446
            ::  |||..|..|  |::: |:|:         |:::|:..||..|.||               |
Zfish   560 QQVSKMTESLVKAEQEVSRLSQDLGVKEEEVNALKEELQAARSSLSSLQAECESRRLEAEEKERE 624

  Fly   447 RNNQLVRDISEARQTLQQVSS---------------TAQDNADK-------------LTEFERV- 482
            .|:||.....|..:..||:||               ||..:||:             |.:.::| 
Zfish   625 HNSQLTSLQQEVLRQTQQLSSYQSRVSDLESEVLSLTAHSHADECEGEQNGTVTVSDLDQLQKVN 689

  Fly   483 ---QLEIIEKNKTIKTLNQRLIDLKKTVQKEL--------------------RSAQISTDSESHP 524
               :.::.|||||||.|.|||.:||:|:||||                    |||:.:......|
Zfish   690 KDLEQQLAEKNKTIKQLQQRLAELKRTLQKELKLKPDPDSEMKERLQDGRQERSAEKTVLETPMP 754

  Fly   525 TTTPGHRISSSSLEAFSTGD---KGNCVIMD--EVNFQYLKHVIVKFLTSREVEARHLVRAVSTL 584
            |..|...:..|......|.:   ..:..|.|  |:||:|||||::||::|||.||..|:||||.|
Zfish   755 TAAPSPALGLSQTPGPITPNTTVTNSSDITDTREINFEYLKHVVLKFMSSREAEAFQLIRAVSVL 819

  Fly   585 LQLTTEEEKLLHDTLNWKMSWFGMKPT 611
            |..:.|||.:|..||.:||||||.||:
Zfish   820 LHFSKEEEDMLKQTLEYKMSWFGSKPS 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin97NP_610875.1 SMC_prok_B <71..465 CDD:274008 127/592 (21%)
Grip 553..598 CDD:197860 26/44 (59%)
golga1NP_957132.2 GumC <47..>244 CDD:442439 32/196 (16%)
Smc <160..>719 CDD:440809 133/574 (23%)
Grip 788..833 CDD:197860 26/44 (59%)

Return to query results.
Submit another query.