DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and Tmprss5

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001346389.1 Gene:Tmprss5 / 80893 MGIID:1933407 Length:455 Species:Mus musculus


Alignment Length:259 Identity:96/259 - (37%)
Similarity:136/259 - (52%) Gaps:29/259 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NGAVIPI-----GLEPQTSSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAH 75
            :|.::.:     |..|    |..|||||.|.:....|||.|:.....|.||.|:::.:.:|||||
Mouse   198 SGRIVSLKCSECGARP----LASRIVGGQAVASGRWPWQASVMLGSRHTCGASVLAPHWVVTAAH 258

  Fly    76 CLDT--PTTVSNLRIRAG----SNKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFG 134
            |:.:  .:.:|:.|:.||    ...|.:.|.:||  .|..|..|::.:...|:.:::|:|.:.|.
Mouse   259 CMYSFRLSRLSSWRVHAGLVSHGAVRQHQGTMVE--KIIPHPLYSAQNHDYDVALLQLRTPINFS 321

  Fly   135 STIKAITMASATPAH---GSAASISGWGKTS-TDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFI 195
            .|:.|:.: .|...|   ||...:||||.|. :...||.||......::....|.||.. |...:
Mouse   322 DTVGAVCL-PAKEQHFPWGSQCWVSGWGHTDPSHTHSSDTLQDTMVPLLSTYLCNSSCM-YSGAL 384

  Fly   196 KATMICAAATN--KDACQGDSGGPLV--SGG--QLVGVVSWGRDCAVANYPGVYANIAELRDWV 253
            ...|:||...:  .||||||||||||  ||.  .|||||||||.||..|.|||||.:||..||:
Mouse   385 THRMLCAGYLDGRADACQGDSGGPLVCPSGDTWHLVGVVSWGRGCAEPNRPGVYAKVAEFLDWI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 90/233 (39%)
Tmprss5NP_001346389.1 SRCR_2 116..213 CDD:464747 2/14 (14%)
Tryp_SPc 217..448 CDD:214473 91/234 (39%)

Return to query results.
Submit another query.