DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:253 Identity:97/253 - (38%)
Similarity:130/253 - (51%) Gaps:32/253 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GLEPQTSSLG-GRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNL 86
            |..|...:|. .||:|||.:...|.|||||||.:..|.|||::|||..::|||||          
  Rat   173 GARPDLITLSEERIIGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHC---------- 227

  Fly    87 RIRAGSNKR----TYG------GVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAIT 141
             .|:.||.:    |:|      .:.|.|.||.||..|||.::.|||.||:|...:||...|..:.
  Rat   228 -FRSYSNPQQWTATFGVSTISPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVC 291

  Fly   142 MASATP--AHGSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAA 204
            :.:||.  ...|.|.::|||..:..|.:...|...:.|||....|.... |||..:...|:||..
  Rat   292 LPAATQNIIPDSVAYVTGWGSLTYGGNTVTNLQQGEVRIVSSEVCNEPA-GYGGSVLPGMLCAGV 355

  Fly   205 TN--KDACQGDSGGPLVSGGQ-----LVGVVSWGRDCAVANYPGVYANIAELRDWVLQ 255
            .:  .||||||||||||....     :||:||||..|.:.|.||||..:...|:|:.|
  Rat   356 RSGAVDACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWIRQ 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 91/236 (39%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 93/240 (39%)
Blue background indicates that the domain is not in the aligned region.

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