DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and zmp:0000001088

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_688573.1 Gene:zmp:0000001088 / 560086 ZFINID:ZDB-GENE-140106-48 Length:263 Species:Danio rerio


Alignment Length:265 Identity:91/265 - (34%)
Similarity:137/265 - (51%) Gaps:35/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLIATFLALLALTNGAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSLQ-RSGSHFCGGSIIS 66
            ||:...|.:||::...||.           .|||||...:.....:.||:| .:|.|||||::|:
Zfish     6 LLLCVLLEILAVSCQDVIQ-----------ARIVGGYVPAPYSIKYIVSIQSATGQHFCGGTLIN 59

  Fly    67 NNIIVTAAHCLDTPTTVSNLRIRAGS-NKRTYGG--------VLVEVAAIKAHEAYNSNSKINDI 122
            ...::|||||   ....:|:||.||. :...|.|        :|:      .|..|:.::...||
Zfish    60 KYWVLTAAHC---NIGEANMRIVAGDYSVGLYEGMEQFRRPHMLI------PHPQYDRSTNNADI 115

  Fly   123 GVVRLKTKLTFGSTIKAITM--ASATPAHGSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCG 185
            .:::|::.:...|.:..:.:  ..|..|.|...|:||||.|::.|..|:.|..|...||..:.| 
Zfish   116 MLIKLQSPVYLNSYVSLVPLPRQDAMVAVGRLCSVSGWGFTTSTGGISSILRTVKLPIVSTAVC- 179

  Fly   186 SSTYGYGSFIKATMICA--AATNKDACQGDSGGPLVSGGQLVGVVSWGRDCAVANYPGVYANIAE 248
            :.|..:...|...||||  :...||||:||||||||..|::.|:||||..||.|.|||||..:::
Zfish   180 NGTDSFNGNITENMICAGYSTGGKDACKGDSGGPLVCEGRVYGIVSWGNGCADAQYPGVYTAVSQ 244

  Fly   249 LRDWV 253
            .|.|:
Zfish   245 FRQWI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 82/231 (35%)
zmp:0000001088XP_688573.1 Tryp_SPc 27..252 CDD:238113 83/233 (36%)

Return to query results.
Submit another query.