DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and cfd

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:234 Identity:69/234 - (29%)
Similarity:116/234 - (49%) Gaps:20/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSN--- 93
            |..|.||..:....||:..|:|.:|.|.|||.:||:..:::||||.....| |.:::..|::   
Zfish    18 GDCITGGQEAKAHSRPYMASVQWNGKHECGGFLISSQWVMSAAHCFQDGRT-SGVKVVLGAHSLS 81

  Fly    94 -----KRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITM---ASATPAHG 150
                 |:|:.      |.:..|..::.::..|||.:::|...:|....:|.:..   .:|.|...
Zfish    82 GAEDTKQTFD------AEVYNHPDFSISNYDNDIALIKLDKPVTQSDAVKPVKFQRDETADPKEA 140

  Fly   151 SAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAATNKDACQGDSG 215
            :....:|||..:..|.....|..:...::.|.:||.:.: ||....:.|:|||...||.|.||||
Zfish   141 AVVETAGWGSLNNMGGRPDKLHELSIPVMERWRCGRADF-YGEKFTSNMLCAADKRKDTCDGDSG 204

  Fly   216 GPLVSGGQLVGVVS-WGRDCAVANYPGVYANIAELRDWV 253
            |||:..|.:||:.| .|:.|..:..||:|..|:....|:
Zfish   205 GPLLYRGIVVGITSNGGKKCGSSRKPGLYTIISHYASWI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 67/229 (29%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 68/231 (29%)

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