DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and Jon99Fi

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_651800.2 Gene:Jon99Fi / 43622 FlyBaseID:FBgn0039778 Length:267 Species:Drosophila melanogaster


Alignment Length:279 Identity:88/279 - (31%)
Similarity:126/279 - (45%) Gaps:46/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLLIATFLALLALTNGAVIP------IGLEPQTSSLGGRIVGGTASSIEDRPWQVSL--QRSGS 57
            |.||:  ||| ||:.....||      :....:...:.|||..|..:.....|:.|.|  ..:|:
  Fly     1 MKLLV--FLA-LAVAAATAIPTPEQKLVPTPVKDVKIQGRITNGYPAYEGKVPYIVGLLFSGNGN 62

  Fly    58 HFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTY--------GGVLVEVAAIKAHEAYN 114
            .:||||||.|..::|||||.:   ..|.:.|..|::.|..        .|..|:      |..||
  Fly    63 WWCGGSIIGNTWVLTAAHCTN---GASGVTINYGASLRNQPQYTHWVGSGNFVQ------HHHYN 118

  Fly   115 SNSKINDIGVVRLKTKLTFGSTIKAITMASATPAH----GSAASISGWGKTSTDGPSSATLLFVD 175
            |.:..|||.::| ...:.|...:..:.:.|....:    |..|..||||.|....|....|..||
  Fly   119 SGNLHNDISLIR-TPHVDFWHLVNKVELPSYNDRYQDYAGWWAVASGWGGTYDGSPLPDWLQAVD 182

  Fly   176 TRIVGRSQCGSSTYGYGSFIKATMICAAATN--KDACQGDSGGPLVS--GGQLVGVVSW--GRDC 234
            .:|:.:|.| |.|:.    :...||| ..||  |..|.||||||||:  |.:||||.|:  ...|
  Fly   183 VQIMSQSDC-SRTWS----LHDNMIC-INTNGGKSTCGGDSGGPLVTHEGNRLVGVTSFVSSAGC 241

  Fly   235 AVANYPGVYANIAELRDWV 253
            . :..|.|::.:....||:
  Fly   242 Q-SGAPAVFSRVTGYLDWI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 75/237 (32%)
Jon99FiNP_651800.2 Tryp_SPc 38..262 CDD:238113 76/239 (32%)

Return to query results.
Submit another query.