DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and snk

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:257 Identity:65/257 - (25%)
Similarity:109/257 - (42%) Gaps:50/257 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GLEPQTSSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLR 87
            ||.|..::||.  ..|:.|..:|..|.          |||:::|...::|||||..:.:...:: 
  Fly   195 GLFPHMAALGW--TQGSGSKDQDIKWG----------CGGALVSELYVLTAAHCATSGSKPPDM- 246

  Fly    88 IRAGS---NKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITMASATPAH 149
            :|.|:   |:.:.....:::..|..|..|.|::..:||.:::|..::.|...::...:.......
  Fly   247 VRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQ 311

  Fly   150 GSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQC----------------GSSTYGYGSFIKAT 198
            ......:|||:|...|..|..|..||..:|.:..|                |....||       
  Fly   312 IPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGY------- 369

  Fly   199 MICAAATNKDACQGDSGGPLVS-------GGQLVGVVSWGRDCAVANYPGVYANIAELRDWV 253
                ....:|.||||||||:.:       ...:||:.|:|:.||..|.||||..:....||:
  Fly   370 ----LPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 59/243 (24%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 65/257 (25%)
Blue background indicates that the domain is not in the aligned region.

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