DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and CG3916

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster


Alignment Length:279 Identity:87/279 - (31%)
Similarity:125/279 - (44%) Gaps:47/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLIATFLALLALTNGA--VIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSL--QRSG--SHFCG 61
            :::..|..||.|..|.  |:....|..|...||:.|..|.      |:||||  ||.|  .||||
  Fly     2 VVLQLFCMLLILRQGLADVVTSTTESPTRINGGQRVNETV------PFQVSLQMQRRGRWQHFCG 60

  Fly    62 GSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYGGVLVEVAAIKAHEAYNSNSK-INDIGVV 125
            |||:|...::|||||:: ...|.::.:..|:.....||:...:.....|..|:.|.: ||||.:|
  Fly    61 GSIVSGQHVLTAAHCME-KMKVEDVSVVVGTLNWKAGGLRHRLVTKHVHPQYSMNPRIINDIALV 124

  Fly   126 R-----------LKTKLTFGSTIKAITMASATPAHGSAASISGWGKTSTDGPSSAT----LLFVD 175
            :           :.|.|..||.    .:....|..     ::|||.|| ...||||    |..::
  Fly   125 KVTPPFRLERSDISTILIGGSD----RIGEKVPVR-----LTGWGSTS-PSTSSATLPDQLQALN 179

  Fly   176 TRIVGRSQCGSSTYGYGSFIKATMICA-AATNKDACQGDSGGPLVSGGQ---LVGVVSWGRDCAV 236
            .|.:....|...    |..:....||| |...:.||.|||||||:..|:   |||:||:|.....
  Fly   180 YRTISNEDCNQK----GFRVTRNEICALAVQGQGACVGDSGGPLIRPGKQPHLVGIVSYGSSTCA 240

  Fly   237 ANYPGVYANIAELRDWVLQ 255
            ...|.||..::....::.|
  Fly   241 QGRPDVYTRVSSFLPYISQ 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 76/241 (32%)
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 78/247 (32%)

Return to query results.
Submit another query.