DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and LPA

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:257 Identity:85/257 - (33%)
Similarity:115/257 - (44%) Gaps:61/257 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LEPQTSSLGGRIVGGTASSIEDRPWQVSLQ-RSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLR 87
            :||:  ...|.||||..:.....||||||: |.|.|||||::||...::||||||...:..|:.:
Human  1811 VEPK--KCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCLKKSSRPSSYK 1873

  Fly    88 IRAGSNKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRL----------KTKLTFGSTIKAITM 142
            :..|                 ||:..|..|.:.:|.|.||          ..||:..:.|....|
Human  1874 VILG-----------------AHQEVNLESHVQEIEVSRLFLEPTQADIALLKLSRPAVITDKVM 1921

  Fly   143 ASATPAHG------SAASISGWGKT-STDGP---SSATLLFVDTRIVGRSQCGSSTYGYGSFIKA 197
            .:..|:..      :...|:|||:| .|.|.   ..|.||.::..:     |....|        
Human  1922 PACLPSPDYMVTARTECYITGWGETQGTFGTGLLKEAQLLVIENEV-----CNHYKY-------- 1973

  Fly   198 TMICA--AATNKDACQGDSGGPLVSGGQ----LVGVVSWGRDCAVANYPGVYANIAELRDWV 253
              |||  .|...|:||||||||||...:    |.||.|||..||..|.|||||.::....|:
Human  1974 --ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARVSRFVTWI 2033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 81/244 (33%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388
KR 1386..1466 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527
Kringle 1720..1799 CDD:395005
Tryp_SPc 1820..2034 CDD:238113 82/246 (33%)
Blue background indicates that the domain is not in the aligned region.

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