DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and Tmprss4

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:236 Identity:87/236 - (36%)
Similarity:124/236 - (52%) Gaps:14/236 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYG 98
            |:|||..:|.:..|||||:|.:..|.|||||:.::.|:|||||......||:.::||||||....
  Rat   245 RVVGGVEASADSWPWQVSIQYNKQHVCGGSILDHHWILTAAHCFRKYLDVSSWKVRAGSNKLGNS 309

  Fly    99 GVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITM----ASATPAHGSAASISGWG 159
            ..| .||.|...|......|..||.:|:||..|||..:::.|.:    ....|.  ....:.|||
  Rat   310 PSL-PVAKIFIAEPNPLQPKEKDIALVKLKMPLTFSGSVRPICLPFSDEELIPT--MPVWVIGWG 371

  Fly   160 KTSTD-GPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAAT--NKDACQGDSGGPLV-- 219
            .|..: |..|.|||....:::..::|.:.. .|...:.|.|:||...  .||.|||||||||:  
  Rat   372 FTEENGGKMSDTLLQASVQVIDSARCNAED-AYQGEVTAGMLCAGTPQGGKDTCQGDSGGPLMYH 435

  Fly   220 -SGGQLVGVVSWGRDCAVANYPGVYANIAELRDWVLQAQKT 259
             ...|:||:||||..|...:.||||..:....||:...:::
  Rat   436 YDKWQVVGIVSWGYGCGSPSTPGVYTKVTAYLDWIYNVRRS 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 85/227 (37%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597
Tryp_SPc 245..470 CDD:214473 86/228 (38%)
Blue background indicates that the domain is not in the aligned region.

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