DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and spirit

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_572492.1 Gene:spirit / 31797 FlyBaseID:FBgn0030051 Length:393 Species:Drosophila melanogaster


Alignment Length:245 Identity:75/245 - (30%)
Similarity:116/245 - (47%) Gaps:41/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IVGGTASSIEDRP------WQVSLQRSGSHFCGGSIISNNIIVTAAHCLD---TPTTVSNLRIRA 90
            :|||..:...:.|      |:.:..:...:.|||::|:||.::|||||.|   .|.  |.:|: .
  Fly   132 VVGGMPTRPREFPFMAALGWRSNFDQRIYYRCGGALIANNFVLTAAHCADLGGEPP--SQVRL-G 193

  Fly    91 GSNKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKT------KLTFGSTIKAITMASATPAH 149
            |.|.....|..:.:..:..|..|::::..|||.::.|:|      |.|...|.|.:|....|.. 
  Fly   194 GDNLTLTEGEDISIRRVIIHPDYSASTAYNDIALLELETAAKPELKPTCIWTQKEVTNTLVTAI- 257

  Fly   150 GSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGY-----GSFIKATMICAA--ATNK 207
                   |:|:||..|.|||.||.|..:.|...:|   .:.|     ...:..|.:||.  ...:
  Fly   258 -------GYGQTSFAGLSSAQLLKVPLKSVSNEEC---QHHYQKDQLAQGVLGTQMCAGDITGER 312

  Fly   208 DACQGDSGGPLVSG----GQLVGVVSWGRDCAVANYPGVYANIAELRDWV 253
            |.|||||||||:..    |.:||:.|.|:.|| :..|.||..::...||:
  Fly   313 DTCQGDSGGPLLMQDGLLGYVVGITSLGQGCA-SGPPSVYTRVSSFVDWI 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 74/243 (30%)
spiritNP_572492.1 CLIP 51..98 CDD:197829
Tryp_SPc 132..364 CDD:238113 75/245 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.