DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and Tmprss6

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001426443.1 Gene:Tmprss6 / 315388 RGDID:1307138 Length:811 Species:Rattus norvegicus


Alignment Length:252 Identity:87/252 - (34%)
Similarity:130/252 - (51%) Gaps:31/252 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GLEPQTSSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLR 87
            ||:..:|    |||||..||..:.|||.|||..|.|.|||::|::..::|||||....:..|. |
  Rat   569 GLQGPSS----RIVGGAMSSEGEWPWQASLQIRGRHICGGALIADRWVITAAHCFQEDSMASP-R 628

  Fly    88 I------RAGSNKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITMASAT 146
            :      :...|.|..|.|..:|:.:..|..:..:|...|:.:::|...:.:.:|::.:.:    
  Rat   629 LWTVFLGKMRQNSRWPGEVSFKVSRLFLHPYHEEDSHDYDVALLQLDHPVVYSATVRPVCL---- 689

  Fly   147 PAH------GSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAA-- 203
            ||.      |....|:|||.....||.|:||..||.:::.:..| :..|.|.  :...|:||.  
  Rat   690 PARSHFFEPGQHCWITGWGAQREGGPGSSTLQKVDVQLIPQDLC-NEAYRYQ--VTPRMLCAGYR 751

  Fly   204 ATNKDACQGDSGGPLV----SGGQ-LVGVVSWGRDCAVANYPGVYANIAELRDWVLQ 255
            ...|||||||||||||    ||.. |.|:||||..|...|:.|||..:..:.:|:.|
  Rat   752 KGKKDACQGDSGGPLVCKEPSGRWFLAGLVSWGLGCGRPNFFGVYTRVTRVVNWIQQ 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 81/236 (34%)
Tmprss6NP_001426443.1 None

Return to query results.
Submit another query.