DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and Ovch2

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:256 Identity:71/256 - (27%)
Similarity:119/256 - (46%) Gaps:28/256 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNK 94
            ||..|||||:.......||||||::...|.|||:|||:..::|||||:........|.:.||.:.
  Rat    47 SLFSRIVGGSQVEKGSYPWQVSLKQKQKHICGGTIISSQWVITAAHCMANRNIALTLNVTAGEHD 111

  Fly    95 RTY---GGVLVEVAAIKAHEAYNSNSKIN-DIGVVRLKTKLTFGSTIKAITMASATPAH----GS 151
            .:.   |...:.:..|..|..:::...:| ||.::::.....||..::.:.:..  |..    |.
  Rat   112 LSQAEPGEQTLAIETIIIHPQFSTKKPMNYDIALLKMVGTFQFGQFVRPVCLPE--PGEQFNAGY 174

  Fly   152 AASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKA-TMICAAATN--KDACQGD 213
            ..:.:|||:.|..|.....|..|:..|:...:|.:......:.|.. |.:|..:.:  :||||||
  Rat   175 ICTTAGWGRLSEGGSLPQVLQQVNLPILTHEECEAVMLTLRNPITGKTFLCTGSPDGGRDACQGD 239

  Fly   214 SGGPLVSGGQ-----LVGVVSWGRDCAVA----------NYPGVYANIAELRDWVLQAQKT 259
            |||.|:...:     |.||.|||..|..:          ..||::.::..:..|:.:..:|
  Rat   240 SGGSLMCQNRKGAWTLAGVTSWGLGCGRSWRNNARKKEQGSPGIFTDLRRVLPWIHEHVQT 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 66/243 (27%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 67/246 (27%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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