DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and F12

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:239 Identity:71/239 - (29%)
Similarity:110/239 - (46%) Gaps:21/239 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYG 98
            |:|||..:.....|:..:|. .|..||.||:|....::||||||........|.:..|.::....
  Rat   361 RVVGGLVALPGSHPYIAALY-WGDSFCAGSLIDPCWVLTAAHCLQKRPAPEELTVVLGQDRHNQS 424

  Fly    99 GVLVEVAAI---KAHEAYNSNSKINDIGVVRLKTKLTFGSTIK------AITMASATPAHGSAAS 154
            ....:..|:   :.||.::|.:..:|:.::||:.:....:.:.      .:..::|.|:......
  Rat   425 CERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCLPSSAAPPSETVLCE 489

  Fly   155 ISGWGKTSTDGPSSATLL-FVDTRIVGRSQCGSSTYGYGSFIKATMICAA--ATNKDACQGDSGG 216
            ::|||.........||.| ......:...:|.||.. :|..|...|:||.  ....|||||||||
  Rat   490 VAGWGHQFEGAEEYATFLQEAQVPFISLDRCSSSNV-HGDAILPGMLCAGFLEGGADACQGDSGG 553

  Fly   217 PL-----VSGGQLV--GVVSWGRDCAVANYPGVYANIAELRDWV 253
            ||     |:..||.  ||:|||..|...|.||||.::|...||:
  Rat   554 PLVCDEGVTERQLTLRGVISWGSGCGDRNKPGVYTDVANYLDWI 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 69/236 (29%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 70/238 (29%)
Blue background indicates that the domain is not in the aligned region.

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