DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and Elane

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001100237.1 Gene:Elane / 299606 RGDID:1307968 Length:271 Species:Rattus norvegicus


Alignment Length:276 Identity:77/276 - (27%)
Similarity:116/276 - (42%) Gaps:70/276 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIATFLALLALTNGAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNN 68
            |.:..||||     .|.|        :|...||||..:.....|:.|||||.|.||||.::|:.|
  Rat    15 LASMLLALL-----LVCP--------ALASEIVGGRPAQPHAWPFMVSLQRRGGHFCGATLIARN 66

  Fly    69 IIVTAAHCLDTPTTVSNLRIRAGSNKRTYGGVLVEVAA--IKAHE--------------AYNSNS 117
            .:::||||:               |.|.:..|.|.:.|  ::..|              .::.:.
  Rat    67 FVMSAAHCV---------------NGRNFQSVQVVLGAHDLRRREPTRQIFSVQRIFENGFDPSR 116

  Fly   118 KINDIGVVRLKTKLTFGS-TIKAITMASATPAHGSAAS------ISGWGKTSTDGPSSATLLFVD 175
            .:|||.:::|.     || ||.|....:..||.|....      ..|||:..|:.|..:.|..::
  Rat   117 LLNDIVIIQLN-----GSATINANVQVAELPAQGQGVGNRTPCVAMGWGRLGTNRPLPSVLQELN 176

  Fly   176 TRIVGRSQCGSSTYGYGSFIKATMICAAATNKDA--CQGDSGGPLVSGGQLVGVVSWGR-DCAVA 237
            ..:| .:.|.          :...:|.....:.|  |.||||||||....:.|:.|:.| .|...
  Rat   177 VTVV-TNLCR----------RRVNVCTLVPRRQAGICFGDSGGPLVCNNLVQGIDSFIRGGCGSG 230

  Fly   238 NYPGVYANIAELRDWV 253
            .||..:|.:||..||:
  Rat   231 FYPDAFAPVAEFADWI 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 68/243 (28%)
ElaneNP_001100237.1 Tryp_SPc 33..249 CDD:238113 69/245 (28%)

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