DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and Cela3b

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:279 Identity:88/279 - (31%)
Similarity:126/279 - (45%) Gaps:58/279 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LALLALTNGAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSLQ--RSGS--HFCGGSIISNNI 69
            |.|:||.:|...| ...|.:     |:|.|..:.....|||||||  :.||  |.|||::|:.:.
  Rat     8 LLLVALASGCGQP-SYNPSS-----RVVNGEDAVPYSWPWQVSLQYEKDGSFHHTCGGTLIAPDW 66

  Fly    70 IVTAAHCLDTPTTVSNLRIRAGSNKRTYGGVLVE-----------VAAIKA-----HEAYNSN-- 116
            ::||.||:.|              .|||..||.|           |..:.|     |..:|||  
  Rat    67 VMTAGHCIST--------------SRTYQVVLGEFERGVEEGPEQVIPVNAGDLFVHPKWNSNCV 117

  Fly   117 SKINDIGVVRLKTKLTFGSTIKAITMASATPA-----HGSAASISGWGKTSTDGPSSATLLFVDT 176
            |..|||.:|:|......|.|::   :|...||     :|:...|||||:.||:||....|.....
  Rat   118 SCGNDIALVKLSRSAQLGDTVQ---LACLPPAGEILPNGAPCYISGWGRLSTNGPLPDKLQQALL 179

  Fly   177 RIVGRSQCGSSTYGYGSFIKATMICAAATNKDACQGDSGGPL---VSGG--QLVGVVSW--GRDC 234
            .:|..:.|....: :|..:|.||:||....:..|.|||||||   ...|  |:.||.|:  ...|
  Rat   180 PVVDYAHCSKWDW-WGFSVKKTMVCAGGDIQSGCNGDSGGPLNCPAENGTWQVHGVTSFVSSLGC 243

  Fly   235 AVANYPGVYANIAELRDWV 253
            .....|.|:..::...:|:
  Rat   244 NTLKKPTVFTRVSAFNEWI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 79/251 (31%)
Cela3bNP_001100162.1 Tryp_SPc 28..265 CDD:238113 80/253 (32%)

Return to query results.
Submit another query.