DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and Hpn

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:249 Identity:95/249 - (38%)
Similarity:130/249 - (52%) Gaps:25/249 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCL-DTPTTVSNLRIRAGSNKRTY 97
            |||||..||:...||||||:..|:|.||||::|.:.::|||||. :....:|..|:.||:..||.
  Rat   203 RIVGGQDSSLGRWPWQVSLRYDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVARTS 267

  Fly    98 -GGVLVEVAAIKAHEAY--------NSNSKINDIGVVRLKTKLTFGSTIKAITMASATPA--HGS 151
             ..|.:.|.|:..|..|        :.||  |||.:|.|.:.|.....|:.:.:.:|..|  .|.
  Rat   268 PHAVQLGVQAVIYHGGYLPFRDPTIDENS--NDIALVHLSSSLPLTEYIQPVCLPAAGQALVDGK 330

  Fly   152 AASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAATNK--DACQGDS 214
            ..:::|||.|...|..:..|......|:....|.|..: ||:.||..|.||.....  |||||||
  Rat   331 VCTVTGWGNTQFYGQQAVVLQEARVPIISNEVCNSPDF-YGNQIKPKMFCAGYPEGGIDACQGDS 394

  Fly   215 GGPLV--------SGGQLVGVVSWGRDCAVANYPGVYANIAELRDWVLQAQKTV 260
            |||.|        |..:|.|:||||..||:|..||||..:.:.|:|:.||.|.|
  Rat   395 GGPFVCEDRISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAIKPV 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 89/239 (37%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736
Tryp_SPc 204..441 CDD:238113 89/239 (37%)
Blue background indicates that the domain is not in the aligned region.

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