DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and Gzma

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:264 Identity:73/264 - (27%)
Similarity:121/264 - (45%) Gaps:27/264 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IATFLALLALTNGAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNI 69
            :.|.:.||.:..|     |.|        ||:||.......||:.|.|:......|.|::|:.|.
  Rat    12 LTTVIFLLLIPEG-----GCE--------RIIGGDTVVPHSRPYMVLLKLKPDSVCAGALIAKNW 63

  Fly    70 IVTAAHCLDTPTTVSNLRIRAGSNKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFG 134
            ::|||||:  |...|.:.:.|.|.|:.....::.|.....:..::.::...|:.::|||.|.|..
  Rat    64 VLTAAHCI--PGKKSEVILGAHSIKKEPEQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLN 126

  Fly   135 STIKAITMA----SATPAHGSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSST-YGYGSF 194
            ..:..:.:.    ...|  |:...::|||:.....|.|.||..|:..::.|..|.... |.:...
  Rat   127 KNVAILHLPKKGDDVKP--GTRCHVAGWGRFHNKSPPSDTLREVNITVIDRKICNDEKHYNFNPV 189

  Fly   195 IKATMICAA--ATNKDACQGDSGGPLVSGGQLVGVVSWGRD--CAVANYPGVYANIAELR-DWVL 254
            |...||||.  ...||:|.|||||||:..|...|:.::|.:  |.....||:|..:::.. ||:.
  Rat   190 IGLNMICAGNLRGGKDSCYGDSGGPLLCEGIFRGITAFGLEGTCGDPKGPGIYTLLSDKHLDWIR 254

  Fly   255 QAQK 258
            :..|
  Rat   255 KTAK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 64/227 (28%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 65/230 (28%)

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