DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and CG30082

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster


Alignment Length:294 Identity:91/294 - (30%)
Similarity:131/294 - (44%) Gaps:65/294 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLLIATFLALLALTN-----------GAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSLQRS 55
            ||.||:|..|:.||.           |..|.:   |.|:    |||||..:.|...||...|.::
  Fly     3 SLWIASFAFLVCLTPKLRAQFIDPNCGTTINL---PPTN----RIVGGRTADIGSNPWLAYLHKN 60

  Fly    56 GSHFCGGSIISNNIIVTAAHCL-------------DTPTTVSNLRIRAGSN--KRTYGGVLVEVA 105
            .|..|.|::|:...::||||||             ||.|     ||...|.  ..||....||.|
  Fly    61 SSLVCTGTLITKRFVLTAAHCLHSFHLLTVRLGEYDTST-----RIDCTSEFCIPTYEEYSVENA 120

  Fly   106 AIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITM---ASATPAHGSAASISGWGKTSTDGPS 167
            .|........:|: ||||:::|...:.:...|:.|.:   ....| :.|....:||||  .|..:
  Fly   121 YIHTFFGGRQDSR-NDIGLLKLNGTVVYKLFIRPICLFRDPGQVP-YSSTYEAAGWGK--IDLIN 181

  Fly   168 SATLL-FVDTRIVGRSQCGSS---TYGYGSFIKATMICAAATNKDACQGDSGGPL---VSGGQL- 224
            :||:| .|:...:.:|.|..|   :..||.|      ||.....|.|.|||||||   :|.|:: 
  Fly   182 TATVLQTVNLIRLDQSDCERSLRTSLSYGQF------CAGQWRADTCSGDSGGPLSRKMSNGRIT 240

  Fly   225 ----VGVVSWGRDCAVANYPGVYANIAELRDWVL 254
                :|:||:|.  .:...||||..:....:|:|
  Fly   241 RTVQLGIVSYGH--YLCRGPGVYTYVPSFTNWIL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 76/247 (31%)
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 78/250 (31%)

Return to query results.
Submit another query.