DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and Klk1

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_036725.2 Gene:Klk1 / 24523 RGDID:2969 Length:261 Species:Rattus norvegicus


Alignment Length:251 Identity:69/251 - (27%)
Similarity:105/251 - (41%) Gaps:42/251 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYG 98
            |::||.......:||||:|.....:.|||.:|..:.::|||||     :.:|.::..|.|.    
  Rat    24 RVIGGYKCEKNSQPWQVALYSFSKYLCGGVLIDPSWVITAAHC-----SSNNYQVWLGRNN---- 79

  Fly    99 GVLVE---------VAAIKAHEAYN-----------SNSKINDIGVVRLKTKLTFGSTIKAITMA 143
              |:|         |:....|..|.           .:...||:.::.|.........:|.|.:.
  Rat    80 --LLEDEPFAQHRLVSQSFPHPDYKPFLMRNHTRKPGDDHSNDLMLLHLSQPADITDGVKVIDLP 142

  Fly   144 SATPAHGSAASISGWGKTST---DGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAAT 205
            :..|..||....||||.|..   :.|..  |..|:..::...:|   ...|...:...|:||...
  Rat   143 TEEPKVGSTCLASGWGSTKPLIWEFPDD--LQCVNIHLLSNEKC---IKAYKEKVTDLMLCAGEL 202

  Fly   206 --NKDACQGDSGGPLVSGGQLVGVVSWGR-DCAVANYPGVYANIAELRDWVLQAQK 258
              .||.|.|||||||:..|.|.|:.|||. .||..|.|.:|..:.:...|:.:..|
  Rat   203 EGGKDTCTGDSGGPLLCDGVLQGITSWGSVPCAKTNMPAIYTKLIKFTSWIKEVMK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 66/243 (27%)
Klk1NP_036725.2 Tryp_SPc 24..253 CDD:214473 67/244 (27%)

Return to query results.
Submit another query.