DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and Cela2a

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_063143222.1 Gene:Cela2a / 24332 RGDID:2548 Length:279 Species:Rattus norvegicus


Alignment Length:293 Identity:92/293 - (31%)
Similarity:135/293 - (46%) Gaps:72/293 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIATFLALLALTNGAVIPIGLEPQTSSLG----------GRIVGGTASSIEDRPWQVSLQRSGS- 57
            :|.|.| |.||..||:          |.|          .|:|||..:|....|||||||...| 
  Rat     1 MIRTLL-LSALVAGAL----------SCGYPTYEVQHDVSRVVGGQEASPNSWPWQVSLQYLSSG 54

  Fly    58 ---HFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTY--------------GGVLVEVA 105
               |.||||:::||.::|||||:              ||.|||              |.:.|:|:
  Rat    55 KWHHTCGGSLVANNWVLTAAHCI--------------SNSRTYRVLLGRHSLSTSESGSLAVQVS 105

  Fly   106 AIKAHEAYNSN--SKINDIGVVRLKTKLTFGSTIKAITMASATPA-----HGSAASISGWGKTST 163
            .:..||.:|:.  |..|||.:|:|.:.:...|.|:.   |...||     :.....::|||:..|
  Rat   106 KLVVHEKWNAQKLSNGNDIALVKLASPVALTSKIQT---ACLPPAGTILPNNYPCYVTGWGRLQT 167

  Fly   164 DGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAATN-KDACQGDSGGPL---VSGG-- 222
            :|.:...|......:|..:.|.|::: :||.:|..|:||.... ..:|.|||||||   .|.|  
  Rat   168 NGATPDVLQQGRLLVVDYATCSSASW-WGSSVKTNMVCAGGDGVTSSCNGDSGGPLNCQASNGQW 231

  Fly   223 QLVGVVSWGR--DCAVANYPGVYANIAELRDWV 253
            |:.|:||:|.  .|.....|.|:..::...||:
  Rat   232 QVHGIVSFGSTLGCNYPRKPSVFTRVSNYIDWI 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 80/250 (32%)
Cela2aXP_063143222.1 None

Return to query results.
Submit another query.