DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and Ctrb1

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:262 Identity:89/262 - (33%)
Similarity:133/262 - (50%) Gaps:16/262 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLIATFLALLALTNGAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSLQ-RSGSHFCGGSIIS 66
            |.:.:..||:..|.|..:|. ::|..:.| .|||.|..:.....||||||| ::|.||||||:||
  Rat     4 LWLLSCFALVGATFGCGVPT-IQPVLTGL-SRIVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLIS 66

  Fly    67 NNIIVTAAHC-LDTPTTVSNLRIRAGSNKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKTK 130
            .:.:|||||| :.|...|.......||::...  .::::|.:..:..:|..:..|||.:::|.|.
  Rat    67 EDWVVTAAHCGVKTSDVVVAGEFDQGSDEENI--QVLKIAQVFKNPKFNMFTVRNDITLLKLATP 129

  Fly   131 LTFGSTIKAITMASATP--AHGSAASISGWGKTSTDG-PSSATLLFVDTRIVGRSQCGSSTYGYG 192
            ..|..|:.|:.:.:...  ..|:..:.:|||||..:. .:...|......||..:.|..|   :|
  Rat   130 AQFSETVSAVCLPNVDDDFPPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADCKKS---WG 191

  Fly   193 SFIKATMICAAATNKDACQGDSGGPLVSGGQ----LVGVVSWGRDCAVANYPGVYANIAELRDWV 253
            |.|...||||.|:...:|.||||||||....    |.|:||||......:.|.||:.:..|..||
  Rat   192 SKITDVMICAGASGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGVCSTSTPAVYSRVTALMPWV 256

  Fly   254 LQ 255
            .|
  Rat   257 QQ 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 77/226 (34%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 80/230 (35%)

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