DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and svh-1

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:244 Identity:69/244 - (28%)
Similarity:106/244 - (43%) Gaps:37/244 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGTASSIEDRPWQVSLQRSG--SHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAG--SNK 94
            |:|||..:.....||..:|:...  :|.||.||:....::|||||.:....||:..:..|  .|.
 Worm   712 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNN 776

  Fly    95 RTYGGVLVEVAAIKAHEAYNSNSKI--NDIGVVRLK-TKLTFGSTIKAITMASA----TPAHGSA 152
            :|.|.  .::..::....|.....|  :||.::.:. ..:.|....:.|.:.|.    ||  |..
 Worm   777 QTDGN--EQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTP--GRQ 837

  Fly   153 ASISGWGKTSTDGPSSATLLFVD------TRIVGRSQCGSSTYGYGSFIKATMICAAATNK--DA 209
            ..:||||        |..|.:.:      ..|:.|..|.:|:..|.|..::. .||.....  |:
 Worm   838 CVVSGWG--------SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSA-FCAGYLEGGIDS 893

  Fly   210 CQGDSGGPLVSGGQ-----LVGVVSWGRDCAVANYPGVYANIAELRDWV 253
            ||||||||.....:     |.||:|||..||....||:|..:|....|:
 Worm   894 CQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 67/241 (28%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 68/243 (28%)
Blue background indicates that the domain is not in the aligned region.

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