DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and try-1

DIOPT Version :9

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_494910.2 Gene:try-1 / 173856 WormBaseID:WBGene00006619 Length:293 Species:Caenorhabditis elegans


Alignment Length:251 Identity:82/251 - (32%)
Similarity:116/251 - (46%) Gaps:14/251 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LALTNGAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVS-LQRSGSHFCGGSIISNNIIVTAAH 75
            ||.|..|..|    ....:|..|::||:.||....||.|. |.|.|.|.||||:|..|.::||||
 Worm    39 LAQTRSAQEP----ADYVTLDHRLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAH 99

  Fly    76 CLDTPTTVSNLRIRAGSNKRTYGGVLVEVAAIKAHEAYNSNSKIN-DIGVVRLKTKLTFGSTIKA 139
            |.......::..:|.|.: |:..|....|.|:..|..||.....: |..::|:...:...:|.:.
 Worm   100 CFAKDRRPTSYSVRVGGH-RSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARP 163

  Fly   140 ITMASATPAHGSAASISGWGKTSTDGPSSA-TLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAA 203
            |.:.|..........::|||.|......|| ||..:...::....|.|.....|.....:|:||.
 Worm   164 ICLPSLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAG 228

  Fly   204 AT--NKDACQGDSGGPLVSG----GQLVGVVSWGRDCAVANYPGVYANIAELRDWV 253
            .:  ..|:|||||||||:..    .:|.||||||..||....||||.|:.....|:
 Worm   229 YSYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 34..253 CDD:214473 75/227 (33%)
Tryp_SPc 35..253 CDD:238113 74/226 (33%)
try-1NP_494910.2 Tryp_SPc 59..285 CDD:238113 75/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.