DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and LOC1277138

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_316577.5 Gene:LOC1277138 / 1277138 VectorBaseID:AGAMI1_005165 Length:270 Species:Anopheles gambiae


Alignment Length:242 Identity:87/242 - (35%)
Similarity:126/242 - (52%) Gaps:32/242 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGTASSIEDRPWQVSLQRS-GSHFCGGSIISNNIIVTAAHCLDTPTT------VSNLRIRAG 91
            |||.||.:||.|.|:.:||:.| |.|.|||||:|....:|||||:.:.||      |....|...
Mosquito    35 RIVNGTDASILDYPFMLSLRGSTGGHSCGGSILSELWAMTAAHCVSSTTTYLQTIQVGRTNISRD 99

  Fly    92 SNKRTYGGVLVEVAAIKAHEAYNS-NSKINDIGVVRLKTKLTFGSTIKAITMASATPA------- 148
            .:...||     :|.:.||..|:| ||.:|||.:::|:..:.|..:::.:.:    ||       
Mosquito   100 VDDSVYG-----IAQVIAHPQYDSRNSHLNDIALLKLQRPIVFSESVQPVRL----PAPMFEVED 155

  Fly   149 --HGSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAA--ATNKDA 209
              .....::.|||..:|.|.:.|||..||..:|...:|.:...|   .|..:.||||  ...|..
Mosquito   156 DLDDLGVTLIGWGLLATGGSAPATLQRVDYYVVPNEECNAIHTG---TIYPSHICAAIPGGGKGQ 217

  Fly   210 CQGDSGGPLVSGGQLVGVVSWG-RDCAVANYPGVYANIAELRDWVLQ 255
            |.|||||||:..|..||:|||. :.||||.||||...::...:::.|
Mosquito   218 CSGDSGGPLLHHGVQVGIVSWSVKPCAVAPYPGVLTKVSHHLEFIQQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 85/237 (36%)
LOC1277138XP_316577.5 None

Return to query results.
Submit another query.