DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and LOC1270209

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_308888.1 Gene:LOC1270209 / 1270209 VectorBaseID:AGAMI1_002591 Length:272 Species:Anopheles gambiae


Alignment Length:258 Identity:99/258 - (38%)
Similarity:146/258 - (56%) Gaps:19/258 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLLIATFLA---------LLALTNGAVIPIGLEPQTSSLGGRIVGGTASSIEDRPWQVSLQRSG 56
            ::|||.:.||         ...|.:|.|:||.  |.||   ||||||..::|.|.|:|:||:::|
Mosquito     9 VALLIGSSLAGWEEDLYQSKRRLPSGLVLPIA--PPTS---GRIVGGFEANIADFPYQLSLRQNG 68

  Fly    57 SHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYGGVLVEVAAIKAHEAYNSNSKIND 121
            :|.||.|:||:|..::||||......|:.:.:|.||..||.|||:.:.|.|..|.:|:.:|...|
Mosquito    69 AHICGASVISSNYALSAAHCTFPAPPVAAITLRGGSTDRTAGGVVFQTAEIINHPSYSDSSLDFD 133

  Fly   122 IGVVRLKTKLTFGSTIKAITMA--SATPAHGSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQC 184
            :.|:|:.|... |:.|..||:|  ......|:...:||||.||..|.....|..|:..::.:..|
Mosquito   134 VCVIRITTSFV-GANIAPITLAPEGTDYPEGTRTMVSGWGATSAIGALPINLQAVEVPLISQESC 197

  Fly   185 GSSTYGYGSFIKATMICAAATNKDACQGDSGGPLVSGGQLVGVVSWGRDCAVANYPGVYANIA 247
             ...:|..| :...|:||:...:|||.|||||||.:.|:.:|:||||....:.|.|||||.:|
Mosquito   198 -RGVWGAAS-VTDNMVCASEPGRDACGGDSGGPLTNNGRQIGIVSWGSPLCLGNLPGVYARVA 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 84/215 (39%)
LOC1270209XP_308888.1 Tryp_SPc 46..259 CDD:214473 85/216 (39%)

Return to query results.
Submit another query.