DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and LOC100497505

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_002940490.1 Gene:LOC100497505 / 100497505 XenbaseID:XB-GENE-29083711 Length:308 Species:Xenopus tropicalis


Alignment Length:255 Identity:82/255 - (32%)
Similarity:113/255 - (44%) Gaps:40/255 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 GRIVGGTASSIEDRPWQVSLQ---RSGS---HFCGGSIISNNIIVTAAHCLD--TPTTVSNLRIR 89
            ||||.|........|||||||   |.|.   |.|||::|..:.|:|||||..  .....:|.||.
 Frog    49 GRIVSGNEVRPYSWPWQVSLQVRPRGGKKYVHVCGGTLIHKSWILTAAHCFQKGKAEDAANWRIV 113

  Fly    90 AGS---NKRTYGGVLVEVAAIKAHEAYNSNSKIN----DIGVVR-----LKTKLTFGSTIKAITM 142
            .|.   |:......:..|..|..||.: |..::|    ||.:|:     :.|.....:.:....|
 Frog   114 VGKHNLNRTEATEKVYSVKRIYRHERF-SYPQLNDLDYDIALVKPAEDIITTHFIHYACLPKKEM 177

  Fly   143 ASATPAHGSAASISGWGKTSTDGPSSATLLFVDTR----IVGRSQCGSSTYGYGSFIKATMICAA 203
            | ..|.|  ...::|||.| ..|..:.||..|..:    |:....|....: :|..|:.:||||.
 Frog   178 A-MHPGH--FCWVTGWGDT-RGGQGNVTLSEVLNQARLPIIDTKTCRHKKF-WGDRIRESMICAG 237

  Fly   204 ATN----KDACQGDSGGPLV-----SGGQLVGVVSWGR-DCAVANYPGVYANIAELRDWV 253
            ..|    ..|||||||||||     ...::.|:||:|. .|.|.|.|.|:...:....|:
 Frog   238 FRNVGGPPAACQGDSGGPLVCQDGRGRWEVHGIVSFGPVGCTVENKPSVFTKTSTYIPWI 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 79/251 (31%)
LOC100497505XP_002940490.1 Tryp_SPc 51..300 CDD:238113 80/253 (32%)

Return to query results.
Submit another query.