DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser8 and tmprss2.6

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_002936535.2 Gene:tmprss2.6 / 100494702 XenbaseID:XB-GENE-5798774 Length:695 Species:Xenopus tropicalis


Alignment Length:246 Identity:96/246 - (39%)
Similarity:131/246 - (53%) Gaps:21/246 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SSLGGRIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAG-- 91
            :|:..||||||:::..:.|||||||......|||||||...|||||||:......|..|:.||  
 Frog   454 NSVTSRIVGGTSAASGNWPWQVSLQDETGFMCGGSIISPKWIVTAAHCVYGLYQSSAWRVFAGVL 518

  Fly    92 -----SNKRTYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITMASATP--AH 149
                 ::..:|   |||  .|.||..:|..|:.|||.:::|..::||....:.:.:.:|..  ..
 Frog   519 SLPRFNDTNSY---LVE--RIIAHPGFNLASRDNDIALMKLTEEITFDDKAQPVCLPNAGMFWEA 578

  Fly   150 GSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAATNK--DACQG 212
            |:...|||||.||..|..||:|.:.:..::....|..|.. |...|.::||||...|.  |.|:|
 Frog   579 GTPCWISGWGTTSEGGNVSASLKYAEVPLIDSKTCNESLV-YNGTITSSMICAGYLNGTIDTCKG 642

  Fly   213 DSGGPLVSGGQ----LVGVVSWGRDCAVANYPGVYANIAELRDWVLQAQKT 259
            |||||||:...    |||..|||..||.||.||||.|:.....|:....:|
 Frog   643 DSGGPLVTQTNGTWWLVGDTSWGYGCARANKPGVYGNMTTFLGWIYLQMRT 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 92/232 (40%)
tmprss2.6XP_002936535.2 LDLa 109..140 CDD:238060
LDLa <244..268 CDD:238060
LDLa 323..352 CDD:238060
SRCR_2 357..452 CDD:464747
Tryp_SPc 460..687 CDD:238113 92/232 (40%)
Blue background indicates that the domain is not in the aligned region.

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