DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser8 and gzma

DIOPT Version :10

Sequence 1:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_012808240.1 Gene:gzma / 100135014 XenbaseID:XB-GENE-482759 Length:267 Species:Xenopus tropicalis


Alignment Length:234 Identity:80/234 - (34%)
Similarity:119/234 - (50%) Gaps:24/234 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IVGGTASSIEDRPWQVSL-QRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNK---R 95
            |:.|..::...||:...: .|:||  |||::|..|.::|||||:     |:|..:..|::|   |
 Frog    35 IIDGREAASHSRPYMAYIYSRTGS--CGGTLIKQNWVLTAAHCV-----VNNSEVILGAHKVKSR 92

  Fly    96 TYGGVLVEVAAIKAHEAYNSNSKINDIGVVRLK--TKLT-FGSTIK-AITMASATPAHGSAASIS 156
            ........||....|..:....||:||.::::|  .||. |.|.:| ..|.....|  ||:.|.:
 Frog    93 ENEQQRFSVARAIPHPCFEWKKKIHDIQLLQIKGAAKLNKFVSVLKLPTTDMDVKP--GSSCSTA 155

  Fly   157 GWGKTSTDGPS-SATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAAATNK-----DACQGDSG 215
            |||.|..:|.: |..|..|:..:|.|..|......:.:.|...|:||.|..|     ||||||||
 Frog   156 GWGVTKPNGKTPSDVLREVNVTVVDRGTCNKIYKKFKTEISTNMLCAGAPKKSDKKYDACQGDSG 220

  Fly   216 GPLVSGGQLVGVVSWGRDCAVANYPGVYANI-AELRDWV 253
            |||:.|.:..|:||:|:.|....|||:|..: |....|:
 Frog   221 GPLICGKEFSGIVSFGKKCGDPKYPGIYTRLTARYLQWI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 79/232 (34%)
gzmaXP_012808240.1 Tryp_SPc 35..262 CDD:238113 80/234 (34%)

Return to query results.
Submit another query.