DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18278 and galns

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001074110.2 Gene:galns / 791159 ZFINID:ZDB-GENE-070112-1152 Length:514 Species:Danio rerio


Alignment Length:468 Identity:108/468 - (23%)
Similarity:169/468 - (36%) Gaps:139/468 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PNILLILSDDQDVELRGMF--PMEHT--IEMLGFGGALFHNAYTPSPICCPARTSLLT------- 77
            |||:::|.||......|:|  |.:.|  ::::...|.||.|.||.:|:|.|:|.:|||       
Zfish    22 PNIIIMLMDDMGWGDLGVFGEPSKETPYLDLMAAQGMLFPNFYTANPLCSPSRAALLTGRLPVRN 86

  Fly    78 GMYAHNHGTRN----NSVSGGCYGPH-------------------WRRALEPRALPYILQQHGYN 119
            |.|..|...||    ..:.||.....                   |......:.||.   :||::
Zfish    87 GFYTTNAHARNAYTPQEIVGGISADEILLPELLKNKHYVSKIVGKWHLGHRTQYLPL---KHGFD 148

  Fly   120 TFFGGKYLNQYWG------AGDVPKGWNHFYGLHGNS----RYYNYTLRENSGNVHYESTYLTDL 174
            .:||..  |.::|      ..::|        ::.||    |||    .|...||....:.||.|
Zfish   149 EWFGAP--NCHFGPYNDSSRPNIP--------VYNNSEMKGRYY----EEFEINVKTGESNLTQL 199

  Fly   175 LRDRAADFLRNATQSSEPFFAMVAPPAAHEPFTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVR 239
            ......||:.....:..|||...||.|.|.|                        |...|.:|.:
Zfish   200 YLKEGLDFISQQAMAQRPFFLYWAPDATHAP------------------------VYASKPFLGK 240

  Fly   240 AARRLPNETINTIDTYFQKRWETLLAVDELVVTL--MGVLNDTQSLENTYIIYTSDNG------- 295
            :.|....:.:..:|.          ::.:::..|  :|:.||      |.:.:|||||       
Zfish   241 SQRGRYGDAVMELDD----------SIGQILAHLVSLGIQND------TLVFFTSDNGAALMSGP 289

  Fly   296 YHVGQFAQPF--DKRQPYETDINVPLLIRGPGIAPESHID-TAVSLVDLAPTILAWADIDTPS-- 355
            ...|..| ||  .|...:|..:..|.:...||..|...:. ...|::||..|.|:.|.:..|.  
Zfish   290 LQSGSNA-PFLCGKETTFEGGMREPAMAWWPGQIPAGTVSHQLASVMDLFSTSLSVAGVSPPDDR 353

  Fly   356 YMDGQSFHELLLNKR---RRVPFFERSLLI---------EYW-GEGTLATFNPE---CPWPEKDR 404
            .:||.....:|.|..   |.:.::..:.::         .|| ...::..||..   ||..|   
Zfish   354 VIDGVDLSPVLFNGSLIDRPIFYYRGNQMMAVRIGQYKAHYWTWSNSMEEFNKGINFCPGQE--- 415

  Fly   405 LAQCTPAADCHCQ 417
                .|....|.|
Zfish   416 ----VPGVTTHTQ 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 108/468 (23%)
AslA 24..464 CDD:225661 108/468 (23%)
galnsNP_001074110.2 AslA 18..475 CDD:225661 108/468 (23%)
GALNS 22..486 CDD:293776 108/468 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592873
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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