DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18278 and gnsa

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001025379.1 Gene:gnsa / 566506 ZFINID:ZDB-GENE-050107-5 Length:538 Species:Danio rerio


Alignment Length:516 Identity:228/516 - (44%)
Similarity:315/516 - (61%) Gaps:37/516 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MISLAPLIIL---VLACLG----NTASEKL---PNILLILSDDQDVELRGMFPMEHTIEMLGFGG 55
            |:| |||::|   ::.|:.    |.|:.|.   |||:|||:||.||.:.||.|:..|.:::|..|
Zfish     1 MVS-APLVLLHCIIVICVTLHCVNLAAAKTNPKPNIVLILTDDLDVSIGGMIPLVKTKKLIGDAG 64

  Fly    56 ALFHNAYTPSPICCPARTSLLTGMYAHNHGTRNNSVSGGCYGPHWRRALEPRALPYILQQH-GYN 119
            ..|.||:..||:|||:|.|:|||.|.|||...||::.|.|....|::..||.|.|..||:| .|.
Zfish    65 ITFTNAFVASPLCCPSRASILTGKYPHNHHVVNNTLEGNCSSTAWQKGQEPDAFPAFLQKHAAYQ 129

  Fly   120 TFFGGKYLNQY-----WGAGDVPKGWNHFYGLHGNSRYYNYTL----RENSGNVHYESTYLTDLL 175
            |||.|||||:|     .|...||.||:|::.|..||:||||||    |......:|...||||:|
Zfish   130 TFFAGKYLNEYGSKKAGGVEHVPLGWDHWFALERNSKYYNYTLSVNGRAQRHGQNYSEDYLTDVL 194

  Fly   176 RDRAADFLRNATQSSEPFFAMVAPPAAHEPFTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVRA 240
            .:.:.|||.|.: :..|||.||:.||.|.|:|.||:::..|..::|.|.|:||...:|||||:|.
Zfish   195 ANVSIDFLENKS-NRRPFFMMVSTPAPHSPWTAAPQYDSSFPDLKAPRDPNFNIHGKDKHWLIRQ 258

  Fly   241 ARR-LPNETINTIDTYFQKRWETLLAVDELVVTLMGVLNDTQSLENTYIIYTSDNGYHVGQFAQP 304
            |:. :.|.::..:|..::|||.|||:||:||..|:..|:....|.|||:|:|||||||.|||:.|
Zfish   259 AKTPMSNASVEFLDNAYRKRWRTLLSVDDLVEKLVRKLDIRGELSNTYVIFTSDNGYHTGQFSLP 323

  Fly   305 FDKRQPYETDINVPLLIRGPGIAPESHIDTAVSLVDLAPTILAWADID-TPSYMDGQSFHELLLN 368
            .||||.||.||.||||:|||.|.|.......::.|||.||||..|..: ..:.|||.||..:::.
Zfish   324 MDKRQLYEFDIRVPLLVRGPNIKPNQTSPLPIANVDLGPTILDIAGYNVNDTQMDGMSFLPIMVG 388

  Fly   369 KRRRVPFFERSLLIEYWGEGTLATFNPECP--WPEKDRLAQCTPAADCHCQDAWNNTYACLRNIR 431
            :... ..:...:|:||.|||...: :|.||  .|   .:::|.|  ||.|:||:||||||:|.:.
Zfish   389 ELNS-SVWRSDVLVEYEGEGRNVS-DPACPLLGP---GVSECFP--DCVCEDAYNNTYACVRTVS 446

  Fly   432 HREDRIYCEFRDNENFLEAYDLQLDPFQMTNIA--YDLLPIERALYSLRLKNLTQCSGHSC 490
            ...:..||||.|||.|:|.|:|..||||::|||  .|...:|:..:  ||..|..|||.||
Zfish   447 PNANLQYCEFDDNEVFVEVYNLTSDPFQLSNIAKSIDQEVLEKMNH--RLMMLQSCSGRSC 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 208/458 (45%)
AslA 24..464 CDD:225661 206/453 (45%)
gnsaNP_001025379.1 AslA 31..480 CDD:225661 207/456 (45%)
G6S 32..482 CDD:293766 208/457 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592850
Domainoid 1 1.000 331 1.000 Domainoid score I1126
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1568
Inparanoid 1 1.050 415 1.000 Inparanoid score I1804
OMA 1 1.010 - - QHG57985
OrthoDB 1 1.010 - - D1273622at2759
OrthoFinder 1 1.000 - - FOG0001009
OrthoInspector 1 1.000 - - otm24476
orthoMCL 1 0.900 - - OOG6_103483
Panther 1 1.100 - - O PTHR43108
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5072
SonicParanoid 1 1.000 - - X5154
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.