DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18278 and ids

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001073537.1 Gene:ids / 559959 ZFINID:ZDB-GENE-061215-37 Length:561 Species:Danio rerio


Alignment Length:465 Identity:94/465 - (20%)
Similarity:165/465 - (35%) Gaps:140/465 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILVLACLGN---TASEKLPNILLILSDDQDVELRGMF--PM--EHTIEMLGFGGALFHNAYTPSP 66
            :.:...||.   .|..|..|:|.:::||....| |.:  |:  ...|:.|.....:|||||....
Zfish    13 VFIFHLLGRDVFAAKSKNFNVLYLIADDLRPTL-GCYSDPVVKSPNIDQLASLSVVFHNAYAQQA 76

  Fly    67 ICCPARTSLLTGMYAHNHGTRNNSVSGGCYGPHWR-RALEPRALPYILQQHGYNTFFGGKYLNQY 130
            :|.|:|.|.||       ..|.::.....:..:|| .|.....||...:.:||.|...||..:..
Zfish    77 VCGPSRVSFLT-------SRRPDTTKLYDFNSYWRVHAGNYTTLPQYFKSNGYTTLSVGKVFHPG 134

  Fly   131 WGAG---DVPKGWNHFYGLHGNSRYY--NYTLRENSGNVHYESTYLTDLL--------------- 175
            ..:.   |.|..|: ....|..|..|  ....::..|.:|      ::||               
Zfish   135 IASNHSDDYPYSWS-VPPYHPPSFEYEKRKVCKDKDGTLH------SNLLCPVNVSEMPLGTLPD 192

  Fly   176 ---RDRAADFLRNATQSSEPFFAMVA-----------------------------------PPAA 202
               .:.|...||:...|.:|||..|.                                   |..|
Zfish   193 MENTEEAIRLLRSMKGSQKPFFLSVGFYKPHIPFRIPQEYLKLYPIENMTLAPDPDVPKKLPDVA 257

  Fly   203 HEPFTPAPRHEGVFSHIEALRTP-SFNQVKQDKHWLVRAARRLPNETINTIDTYFQKRWETLLAV 266
            :.|:|...:.|.|    :||... .:..:.:|....:|                 |..:.::..|
Zfish   258 YNPWTDIRKREDV----QALNLSFPYGPIPKDFQLRIR-----------------QHYFASVSYV 301

  Fly   267 DELVVTLMGVLNDTQSLENTYIIYTSDNGYHVGQFAQPFDKRQPYETDINVPLLIRGPGIA---- 327
            |..|..::..|:|....:||.::.:||:|:.:|:..: :.|...::....|||::...|::    
Zfish   302 DAQVGKILQTLDDVGLAKNTIVVLSSDHGWSLGEHGE-WAKYSNFDVATRVPLMVYKAGVSSRRS 365

  Fly   328 ---------------PESH------IDTAVSLVDLAPTILAWADI------DTPSY-MD----GQ 360
                           ...|      :::.|.|:|:.||:...|.:      .:||: ||    |.
Zfish   366 RPGAKTFPFIDVFQDTREHFGKGKIVNSVVELLDVFPTLANLAGLPSVHHCPSPSFKMDLCTEGS 430

  Fly   361 SFHELLLNKR 370
            :...|:.|.:
Zfish   431 NLANLIRNPK 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 90/447 (20%)
AslA 24..464 CDD:225661 90/447 (20%)
idsNP_001073537.1 iduronate-2-sulfatase 29..527 CDD:293754 91/449 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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