DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18278 and Arsa

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001030105.2 Gene:Arsa / 315222 RGDID:1310381 Length:507 Species:Rattus norvegicus


Alignment Length:529 Identity:127/529 - (24%)
Similarity:174/529 - (32%) Gaps:167/529 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IILVLACLGNTASEKLPNILLILSDDQDVELRGMF--PMEHT--IEMLGFGGALFHNAYTPSPIC 68
            ::|.||...:|||.  |||:||.:||......|.:  |...|  ::.|..||..|.:.|.|..:|
  Rat     7 LVLALAAGLSTASP--PNIMLIFADDLGYGDLGSYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLC 69

  Fly    69 CPARTSLLT-------GMYAHNHGTRNNSVSGGCYGPHWRRALEPRALPYILQQHGYNTFFGGKY 126
            .|:|.:|||       |||.   |....|..||.       .||...|..:|...||.|...|| 
  Rat    70 TPSRAALLTGRLPVRSGMYP---GVLGPSSQGGL-------PLEEVTLAEVLAARGYLTGMAGK- 123

  Fly   127 LNQYWGAGDVP--------KGWNHFYGL---HGNSRYYNYT-----LRENSG------------- 162
                |..|..|        :|::.|.|:   |......|.|     :..:.|             
  Rat   124 ----WHLGVGPEGAFLPPHQGFHRFLGIPYSHDQGPCQNLTCFPPDITCSGGCDQGLVPIPLLAN 184

  Fly   163 -NVHYESTYLTDL-------LRDRAADFLRNATQSSEPFFAMVAPPAAHEPFTPAPRHEGVFSHI 219
             .|..:..:|..|       .||..||    |.:...|||...|....|.|         .||  
  Rat   185 LTVEAQPPWLPGLEARYVSFSRDLMAD----AQRQGRPFFLYYASHHTHYP---------QFS-- 234

  Fly   220 EALRTPSFNQVKQDKHWLVRAARRLPNETINTIDTYFQKR------WETLLAVDELVVTLMGVLN 278
                                             ...|.||      .::|:.:|..|..||..:.
  Rat   235 ---------------------------------GQSFTKRSGRGPFGDSLMELDGAVGALMTAVG 266

  Fly   279 DTQSLENTYIIYTSDNGYHVGQFAQ-------PFDKRQPYETDINVPLLIRGPGIAPESHIDTAV 336
            |...|..|.:|:|:|||..:.:.:.       ...|...:|..:..|.|:..||     ||...|
  Rat   267 DLGLLGETLVIFTADNGPELMRMSDGGCSGLLRCGKGTTFEGGVREPALVYWPG-----HITPGV 326

  Fly   337 -----SLVDLAPTILAWADIDTPSY-MDGQSFHELLL---NKRRRVPFFERSLLIEYWGEGTLAT 392
                 |.:||.||:.|......|:. :||.....|||   ...|...||......|.  .|..|.
  Rat   327 THELASSLDLLPTLAALTGAPLPNITLDGVDISPLLLGTGKSPRNSVFFYPPFPDEI--HGVFAV 389

  Fly   393 FNPECP---WPEKDRLAQCTPAADCHCQDAWNNTYACLRNIRHREDRIYCEFRDNENFLEAYDLQ 454
            .|.:..   :.:....:..||...||         |..|...|....:             |||.
  Rat   390 RNGKYKAHFFTQGSAHSDTTPDPACH---------AANRLTAHEPPLL-------------YDLS 432

  Fly   455 LDPFQMTNI 463
            .||.:..|:
  Rat   433 KDPGENYNL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 121/513 (24%)
AslA 24..464 CDD:225661 121/513 (24%)
ArsaNP_001030105.2 AslA 17..470 CDD:225661 124/519 (24%)
ALP_like 20..503 CDD:304875 121/516 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351123
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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