DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18278 and Arse

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001041350.1 Gene:Arse / 310326 RGDID:1304917 Length:611 Species:Rattus norvegicus


Alignment Length:652 Identity:126/652 - (19%)
Similarity:197/652 - (30%) Gaps:232/652 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 APLIILVLACLGNTASEKL------PNILLILSDDQDVELRGMF-------PMEHTIEMLGFGGA 56
            :|..:|.:..||....:.|      ||.|:|::||..:...|.:       |   .|:.|...|.
  Rat    10 SPATLLCIVLLGLQYVDALRSPPPRPNFLIIMADDLGIGDLGCYGNTSIRTP---NIDRLAEDGV 71

  Fly    57 LFHNAYTPSPICCPARTSLLTGMY------AHNHGTRNNSVSGGCYGPHWRRALEPRALPY--IL 113
            ..........:|.|:|.:.|||.|      ...:|.|....:.|..|      |.|:.:.:  ||
  Rat    72 RLTQYLAAESVCTPSRAAFLTGRYPIRSGMTSGNGHRVLQWAAGAGG------LPPKEITFARIL 130

  Fly   114 QQHGYNTFFGGKYLNQYWGAG------------DVPKGWNHFYGL-------------------- 146
            |..||.|...||     |..|            .:..|::||.||                    
  Rat   131 QGQGYVTGLVGK-----WHLGLSCRTVSDLCHHPLNHGFHHFLGLPLGMMGDCAGAEPSEKRAGL 190

  Fly   147 ------------------------HGN---------------------------------SRYYN 154
                                    .|.                                 :||..
  Rat   191 ERRLRGAGRALAAVAVAIAALAWGRGRGLAPACWAPWAAIALGAVAAIFEAGSYVVGGAVARYDC 255

  Fly   155 YTLRENSGNVH-YESTYLTDLLRDRAADFLRNATQSSEPFFAMVAPPAAHEPFTPAPRHEGVFSH 218
            :.:|..:.... .:..::|.||...|.||||....:  ||...::....|.|...:|...|    
  Rat   256 FLMRNATVTQQPLQLDHVTPLLLREAKDFLRRHRHA--PFLLFLSLLHTHTPLVTSPEFRG---- 314

  Fly   219 IEALRTPSFNQVKQDKHWLVRAARRLPNETINTIDTYFQKRWETLLAVDELVVTLMGVLNDTQSL 283
                                |:|.....:.:..:|      |        :|..::.||......
  Rat   315 --------------------RSAHGRYGDNVEEMD------W--------VVGQILEVLEHEGLT 345

  Fly   284 ENTYIIYTSDNGYHVGQFAQPFDKR--------------QPYETDINVPLLIRGPGIAPESHI-D 333
            ::|.:.:|||||..:.  ||...::              ..:|..|.||.:.|.||:.|...: |
  Rat   346 DSTLVHFTSDNGAWLE--AQAGGEQLGGSNGVFRGGKGMGGWEGGIRVPGVFRWPGVLPRGRVLD 408

  Fly   334 TAVSLVDLAPTILAWADIDTPS--YMDGQSFHELLLNKRRRVPFFERSLLIEYWGEGTLATFNPE 396
            ..|||:|:.||::.......||  .:||:....||   |.........:|:.|     ...|...
  Rat   409 QPVSLMDVFPTVVRLGGGVLPSDREIDGRDLLPLL---RGETWHSAHEVLLHY-----CEVFLHA 465

  Fly   397 CPWPEKD-----RLAQCTPAAD------CHCQDAWNNTYACLRNIRHREDRIYCEFRDN------ 444
            ..|.::|     :....||..|      |...........|:..:...:..:..|...:      
  Rat   466 VRWVQRDSGQVWKAHFVTPTFDPLGSGSCSGAGGAAAVCPCVGKVEEHDPPLLFELTSDPGEVRP 530

  Fly   445 ----------ENFLEAYDLQLDPFQMTNIA-----YDLL-------PIER-ALYSLRLKNLTQCS 486
                      .|...|...:.....|...|     ||:|       |.:. :||:|.|..|..|.
  Rat   531 LRAPAKMSEAPNLTAAITSEAVTAAMATAARVRQEYDMLRPTAGHVPQQMGSLYNLWLPWLQPCC 595

  Fly   487 GH 488
            ||
  Rat   596 GH 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 110/596 (18%)
AslA 24..464 CDD:225661 108/588 (18%)
ArseNP_001041350.1 AslA 31..541 CDD:225661 105/573 (18%)
ALP_like 34..531 CDD:304875 105/560 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351115
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1273622at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.