DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18278 and Galns

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_017456734.1 Gene:Galns / 292073 RGDID:1565391 Length:567 Species:Rattus norvegicus


Alignment Length:344 Identity:80/344 - (23%)
Similarity:122/344 - (35%) Gaps:86/344 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LRGMFPMEHTIEMLGFGGALFH--NAYTPSPIC--CPARTSLLTGMYAHNHGTRNNSVSGGCYGP 98
            |.|..|:.:     ||.....|  |||||..|.  .|....||..:......|  |.:.|     
  Rat   131 LTGRLPIRN-----GFYTTNAHARNAYTPQEIMGGIPNSEHLLPELLKKAGYT--NKIVG----- 183

  Fly    99 HWRRALEPRALPYILQQHGYNTFFG------GKYLNQYWGAGDVPKGWNHFYGLHGNSRYY-NYT 156
            .|.....|:..|.   :||::.:||      |.|.|:......|.:.|...      .|:| .:.
  Rat   184 KWHLGHRPQFHPL---KHGFDEWFGSPNCHFGPYDNKVKPNIPVYRDWEMV------GRFYEEFP 239

  Fly   157 LRENSGNVHYESTYLTDLLRDRAADFLRNATQSSEPFFAMVAPPAAHEPFTPAPRHEGVFSHIEA 221
            :...:|..:     ||.|....|.||:|.......|||...|..|.|.|                
  Rat   240 INLKTGEAN-----LTQLYLQEALDFIRTQHARQSPFFLYWAIDATHAP---------------- 283

  Fly   222 LRTPSFNQVKQDKHWLVRAARRLPNETINTIDTYFQKRWETLLAVDELVVTLMGVLNDTQSLENT 286
                    |...|.:|..:.|....:.:..|              |:.|..::.:|.:....:||
  Rat   284 --------VYASKQFLGTSLRGRYGDAVREI--------------DDSVGKILSLLQNLGISKNT 326

  Fly   287 YIIYTSDNGYHV------GQFAQPF--DKRQPYETDINVPLLIRGPGIAPESHIDTAV-SLVDLA 342
            ::.:|||||..:      |....||  .|:..:|..:..|.:...||......:...: |::||.
  Rat   327 FVFFTSDNGAALISAPKEGGSNGPFLCGKQTTFEGGMREPAIAWWPGHIAAGQVSHQLGSIMDLF 391

  Fly   343 PTILAWADIDTPS--YMDG 359
            .|.|:.|.:..||  .:||
  Rat   392 TTSLSLAGLKPPSDRVIDG 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 80/344 (23%)
AslA 24..464 CDD:225661 80/344 (23%)
GalnsXP_017456734.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351125
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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