DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18278 and Sts

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_036793.2 Gene:Sts / 24800 RGDID:3783 Length:577 Species:Rattus norvegicus


Alignment Length:583 Identity:118/583 - (20%)
Similarity:181/583 - (31%) Gaps:203/583 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PNILLILSDDQDVELRGMF-----PMEHTIEMLGFGGALFHNAYTPSPICCPARTSLLTGMYAHN 83
            ||.|||::||..:...|.:     ...| |:.|...|.........:|:|.|:|.:.|||.|...
  Rat    26 PNFLLIMADDLGIGDLGCYGNRTLRTPH-IDRLALEGVKLTQHLAAAPLCTPSRAAFLTGRYPVR 89

  Fly    84 HGTRNN--------SVSGGCYGPHWRRALEPRALPY--ILQQHGYNTFFGGKYLNQYWGAG---D 135
            .|..::        |.|.|        .|.|..:.:  :|:..||.|...||     |..|   .
  Rat    90 SGMASHGRLGVFLFSASSG--------GLPPNEVTFAKLLKGQGYTTGLVGK-----WHLGLSCQ 141

  Fly   136 VPKGWNHFYGLHGNSRYY---NYTLRE---NSGNV------------------------------ 164
            ....:.|..|.||..|:.   ...||:   ..|.|                              
  Rat   142 AASDFCHHPGRHGFDRFLGTPTTNLRDCKPGGGTVFGSAQQVFVVLPMNILGAVLLAMALARWAG 206

  Fly   165 ----------------------------HYE----------------STY--LTDLLRDRAADFL 183
                                        |:.                :.|  ||..|...|.|||
  Rat   207 LARPPGWVFGVTVAAMAAVGGAYVAFLYHFRPANCFLMADFTITQQPTDYKGLTQRLASEAGDFL 271

  Fly   184 RNATQSSEPFFAMVAPPAAHEPFTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVRAARRLPNET 248
            |.  ....||...::....|......|...|...|      .::....::..|            
  Rat   272 RR--NRDTPFLLFLSFMHVHTAHFANPEFAGQSLH------GAYGDAVEEMDW------------ 316

  Fly   249 INTIDTYFQKRWETLLAVDELVVTL--MGVLNDTQSLENTYIIYTSDNGYHVGQFAQPFD----- 306
                            ||.:::.||  :|:.|      ||.:.:|||:|.||.:.....:     
  Rat   317 ----------------AVGQVLATLDKLGLAN------NTLVYFTSDHGAHVEELGPNGERHGGS 359

  Fly   307 -------KRQPYETDINVPLLIRGPG-IAPESHIDTAVSLVDLAPTI--LAWADIDTPSYMDGQS 361
                   |...:|..|.||.|:|.|| |.|...::...|.:|:.||:  ||.|::.|...:||:.
  Rat   360 NGIYRGGKANTWEGGIRVPGLVRWPGVIVPGQEVEEPTSNMDVFPTVARLAGAELPTDRVIDGRD 424

  Fly   362 FHELLLNKRRRVPFFERSLLIEYWGEGTLAT----FNPECPWPEKDRLAQCTPAADCHCQDAWNN 422
            ...|||.   .|...|...|..|......|.    .|....|    :....||..|....:...:
  Rat   425 LMPLLLG---HVQHSEHEFLFHYCNAYLSAVRWRPHNSSSVW----KAFYFTPNFDPPGSNGCFS 482

  Fly   423 TYACL---RNIRHREDRIYCEFRDNENFLEAYDLQLDPFQMTNIAYDLLPIERALYSLRLKNL 482
            |:.|:   .::.|.:..:            .:|:..||.:    .:.|.|.....:...|:|:
  Rat   483 THVCMCHGHHVTHHDPPL------------LFDIARDPRE----RHPLTPETEPRHGEILRNM 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 114/566 (20%)
AslA 24..464 CDD:225661 114/563 (20%)
StsNP_036793.2 ALP_like 26..548 CDD:419962 118/583 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351131
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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