DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18278 and arsh

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_002941046.2 Gene:arsh / 100494567 XenbaseID:XB-GENE-6465035 Length:581 Species:Xenopus tropicalis


Alignment Length:634 Identity:122/634 - (19%)
Similarity:195/634 - (30%) Gaps:267/634 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ISLAPLIILVL--ACLGNTASEKLPNILLILSDDQDVELRGMF-------PMEHTIEMLGFGGAL 57
            ::|.|.::|:|  :.:..|...| ||.:|.::||..:...|.:       |   .|:.|...|..
 Frog    13 MALFPAVLLLLWASTIPETHGNK-PNFVLFMADDLGIGEVGCYGNNTLRTP---NIDRLAREGVR 73

  Fly    58 FHNAYTPSPICCPARTSLLTGMYAHNHGTRN----------NSVSGGCYGPHWRRALEPRALP-- 110
            ..:....:.:|.|:|.:.|||.|....|...          ::||||              ||  
 Frog    74 LTHHIAAASLCTPSRAAFLTGRYPIRSGMTGHEGGYLVLMWSAVSGG--------------LPTN 124

  Fly   111 -----YILQQHGYNTFFGGKYLNQYWGAG------------DVPKGWNHFYGLHGNSRYYNYTL- 157
                 .|||:.||.|...||     |..|            .:..|:::||||       .||| 
 Frog   125 ETTFAKILQEQGYTTGIIGK-----WHLGVNCRSKNDFCYHPLNHGFDYFYGL-------TYTLI 177

  Fly   158 ----RENSGNVH-------------YESTYLTDLLRDR--------------------------- 178
                ......:|             :..|.||.::..|                           
 Frog   178 NDCEESMPSEIHVPFRAKLQFYAQLFAMTLLTAMVSKRMGLLPVSWKVLVIFACFVVLYFTYWFA 242

  Fly   179 AADFLR---------------------------NATQS------SEPFFAMV------APPAAHE 204
            |..|||                           |..:|      ..||...|      :|.:..|
 Frog   243 AYAFLRYWNCFLMRDFEITEQPMDLETTAGKMVNEAKSFISRNKEGPFLLFVSFLHIHSPHSTTE 307

  Fly   205 PFTPAPRHEGVFSHIEALRTPSFNQVKQDKHWLVRAARRLPNETINTIDTYFQKRWETLLAVDEL 269
            .|....:||....:||            :..|::                     .|.|.|:|: 
 Frog   308 KFRGKSKHERYGDNIE------------EMDWMI---------------------GEILGAIDQ- 338

  Fly   270 VVTLMGVLNDTQSLENTYIIYTSDNGYHVGQFAQPFDKRQPY-------------ETDINVPLLI 321
                .|::|      ||...:|||:|.|:....   .|.|.:             |..|.||.:.
 Frog   339 ----EGLVN------NTLTYFTSDHGAHLEGMN---SKSQGFNGIYRGGKGIGGLEGAIRVPGIF 390

  Fly   322 RGPGIAP-ESHIDTAVSLVDLAPTI--LAWADIDTPSYMDGQ------------SFHELLL---- 367
            |.||:.| .:.||...||:|:..|:  |....:.....:||:            |.|:.:.    
 Frog   391 RWPGVFPANTIIDEPTSLMDIYTTVIKLGGGKLPEDRIIDGKDLVPLMQGLDSVSPHDFMFHYCT 455

  Fly   368 NKRRRVPFFERS----LLIEYWGEGTLATFNPECPWPEKDRLAQCTPAADCHCQDAWNNTYACLR 428
            ::...|.::::|    ..:.|..    ..|.||       ....|.....|.|  :.|..     
 Frog   456 DQLHTVRWYQKSNHTVWKVHYMS----PKFTPE-------GAGACYGTKFCSC--SGNGV----- 502

  Fly   429 NIRHREDRIYCEFRDNENFLEAYDLQLDPFQMTNIAYDLLPIERALYSL 477
             |.|....:             |:|..||.:...:.:|:.|.:..:..:
 Frog   503 -ILHDPPLL-------------YNLSGDPSEKNPLPHDVGPYQEVVQEI 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 114/598 (19%)
AslA 24..464 CDD:225661 114/595 (19%)
arshXP_002941046.2 AslA 34..453 CDD:225661 99/495 (20%)
ALP_like 35..555 CDD:304875 117/612 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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