DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18278 and arsh

DIOPT Version :9

Sequence 1:NP_725289.1 Gene:CG18278 / 36487 FlyBaseID:FBgn0033836 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_003199313.1 Gene:arsh / 100332997 ZFINID:ZDB-GENE-081104-120 Length:583 Species:Danio rerio


Alignment Length:514 Identity:103/514 - (20%)
Similarity:154/514 - (29%) Gaps:204/514 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ISLAPLIILVLACLGNTASEKLPNILLILSDDQDVELRGMF-------PMEHTIEMLGFGGALFH 59
            :|...|.:....|..:...:..||.:|::.||..:...|.:       |   .|:.|...|....
Zfish    12 VSALLLFLQFCWCFSDGDQKSRPNFVLMMVDDLGIGDIGCYGNTTIRTP---NIDRLASDGVKLT 73

  Fly    60 NAYTPSPICCPARTSLLTGMYAHNHGTRNN---------SVSGGCYGPHWRRALEPRALPY--IL 113
            :..:.:|:|.|:||:.:||.|....|..:.         :.|||         |.|....:  :|
Zfish    74 HHLSAAPLCTPSRTAFMTGRYPLRAGMGSTGRVQVILFLAGSGG---------LPPNETTFAKLL 129

  Fly   114 QQHGYNTFFGGKYLNQYWGAG-------DV---PK--GWNHFYGL-------------------- 146
            |:.||.|...||     |..|       |:   |.  |::.||||                    
Zfish   130 QKQGYTTGIVGK-----WHLGVNCESRSDLCHHPNNHGFDFFYGLPFTLFVDCAVGAGSGVLLDY 189

  Fly   147 ---------------------------------------------------HGNSRYYNYTLREN 160
                                                               .|..|.:|..|..|
Zfish   190 QEMLLNSCKLLLVCVLTLLALRGSGLLCAGWRLLFHLSAAALICFLLWFVPFGLLRVWNCILMRN 254

  Fly   161 SGNVHYESTYLTDLLRDRAADFLRNATQSSE-----PFFAMVAPPAAHEP------FTPAPRHEG 214
            ...|.......|  |..|   .:|.|.|..|     ||...|:.|..|.|      |....||..
Zfish   255 GEVVEQPMNLQT--LNSR---LMREAEQFMERHRDGPFLLFVSFPQVHTPMLVTEGFAGKSRHGL 314

  Fly   215 VFSHIEALRTPSFNQVKQDKHWLVRAARRLPNETINTIDTYFQKRWETLLAVDELVVTLMGVLND 279
            ...::|            :..|:|.          ..:||           :|.|.:|       
Zfish   315 YGDNVE------------EVDWMVG----------RVVDT-----------IDRLGLT------- 339

  Fly   280 TQSLENTYIIYTSDNG--------------YHVGQFAQPFDKRQPYETDINVPLLIRGPG-IAPE 329
                |.|.:.:|||:|              |..|:....:|      ..|.||.:.|.|| :|..
Zfish   340 ----EKTLLYFTSDHGGGIEEGPRGGWNGIYRGGKAMGGWD------GGIRVPGIFRWPGRLAAG 394

  Fly   330 SHIDTAVSLVDLAPTI--LAWADIDTPSYMDGQSFHELLLNKRRRVPFFERSLLIEYWG 386
            ..:....||:|:.||:  ||..::.....:||.....||.....|   .:...:..|.|
Zfish   395 REVAEPTSLMDVFPTVVKLAGGELPKDRLLDGHDLMPLLEGSSSR---SQHEFMFHYCG 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18278NP_725289.1 G6S 24..467 CDD:293766 100/492 (20%)
AslA 24..464 CDD:225661 100/492 (20%)
arshXP_003199313.1 AslA 31..453 CDD:225661 100/495 (20%)
ALP_like 33..553 CDD:304875 100/493 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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