DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh31-R and Pth2r

DIOPT Version :9

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_112351.2 Gene:Pth2r / 81753 RGDID:620612 Length:546 Species:Rattus norvegicus


Alignment Length:566 Identity:146/566 - (25%)
Similarity:228/566 - (40%) Gaps:113/566 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LRAACETRLNASGQLAGSGGPGAEAGTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARYA 104
            ::|..:..||.:.|.....|       :|...:||.:|||....|.::...||.::..|:....|
  Rat    42 MKAKMQCELNITAQFQEGEG-------NCFPEWDGLICWPRGTAGKTSAMPCPSYVYDFNHKGVA 99

  Fly   105 HKECGLDGEW-FKHPLTNKTWSNYTTCVNLEDLN-----WRHTVNLISEVGYGTSLLAILLSLAI 163
            .:.|..:|.| |.|. :||||:||:.|....|:|     :...:.::..|||..|..::.:::.|
  Rat   100 FRHCTPNGTWDFIHG-SNKTWANYSDCFLQPDINIGKQEFFENLYILYTVGYSISFGSLAVAILI 163

  Fly   164 LGYFKSLKCARITLHMNLFASFAANNSLWLV------WYLLVMPNSELLHQSPMR---------- 212
            :|||:.|.|.|..:|::||.||........|      .:|.|.....|:.|..::          
  Rat   164 IGYFRRLHCTRNYIHLHLFVSFMLRAMSIFVKDRVAQAHLGVEALQSLVMQGDLQNFIGGPSVDK 228

  Fly   213 -----CVALHITLHYFLLSNYSWMLCEGFYLHTVLVAAFISEKRLVKWLIAFGWGSPAIVIFVYS 272
                 |....:...|||.:||.|:|.||.|||.::..:|.|:.:.:...|..|||.||:.:..::
  Rat   229 SQYVGCKIAVVMFIYFLATNYYWILVEGLYLHNLIFVSFFSDTKYLWGFILIGWGFPAVFVVAWA 293

  Fly   273 MARGLGGTPEDNRHCWMNQTNYQNILMVPVCISMFLNLLFLCNIVRVVLLKL---NAPASIQGSC 334
            :||   .|..|.| ||......:.|...|:..::.||.:...|.|||:..|:   ||...     
  Rat   294 VAR---ATLADTR-CWELSAGDRWIYQAPILAAIGLNFILFLNTVRVLATKIWETNAVGH----- 349

  Fly   335 GPSRTVLQAFRATLLLVPLLGLQYILTPFRPAPKHPWENT-YEI---ISAFTASFQGLCVAILFC 395
            ...:...:..::||:||.:.|:.||:...:|   |.:... :||   ...|..||||..|:|::|
  Rat   350 DMRKQYRKLAKSTLVLVLVFGVHYIVFICQP---HSFSGLWWEIRMHCELFFNSFQGFFVSIVYC 411

  Fly   396 FCNGEVIAQMKRKWRMMCFSNRPRTNSYTATQVSF-VRCGPPLPGEEKVXLKDMSAKRRASAGPQ 459
            :|||||.|::|:.|              |...:|. .:..||..|                    
  Rat   412 YCNGEVQAEVKKTW--------------TRWNLSIDWKKAPPCGG-------------------- 442

  Fly   460 HHQPHHQSHQLSTDQQRARSQSLASSSSFLEGWRDRMPFLKRRQTIDH---------------SR 509
                |.....|:|......|||....|:.|.....:......||...|               ..
  Rat   443 ----HRYGSVLTTVTHSTSSQSQMGPSTRLVLISSKPAKTACRQIDSHVTLPGYVWSSSEQDCQP 503

  Fly   510 QSQPLMEEGGETVGQAKSAPGAVDRPTLMTTIAEDVAETGTAATSH 555
            ||.|...:.|....:..|..|...||...|...|     |....||
  Rat   504 QSTPEETKKGHGRQEDDSPVGESSRPVAFTIDTE-----GCKGESH 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:280888 23/67 (34%)
7tm_4 140..390 CDD:304433 76/277 (27%)
Pth2rNP_112351.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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