DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh31-R and Pth1r

DIOPT Version :10

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_038937952.2 Gene:Pth1r / 56813 RGDID:3442 Length:709 Species:Rattus norvegicus


Alignment Length:511 Identity:151/511 - (29%)
Similarity:238/511 - (46%) Gaps:78/511 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARYAHKECGLDGEWFKHPLTNKTWSNYTT 129
            |..|...:|..:|||..|.|......|||:|..|:...:|::.|..:|.|...|..|:||:||:.
  Rat   223 GRPCLPEWDNIVCWPLGAPGEVVAVPCPDYIYDFNHKGHAYRRCDRNGSWEVVPGHNRTWANYSE 287

  Fly   130 CVNLEDLNWRH-----TVNLISEVGYGTSLLAILLSLAILGYFKSLKCARITLHMNLFASF---A 186
            |:.......|.     .:.:|..|||..||.::.:::.||.||:.|.|.|..:||::|.||   |
  Rat   288 CLKFMTNETREREVFDRLGMIYTVGYSMSLASLTVAVLILAYFRRLHCTRNYIHMHMFLSFMLRA 352

  Fly   187 ANNSLWL---VWYL-LVMPNSELLHQSPMRCVA-----------------LHITLH-YFLLSNYS 229
            |  |:::   |.|. ..:..:|.|.:..:..:|                 :.:|.. |||.:||.
  Rat   353 A--SIFVKDAVLYSGFTLDEAERLTEEELHIIAQVPPPPAAAAVGYAGCRVAVTFFLYFLATNYY 415

  Fly   230 WMLCEGFYLHTVLVAAFISEKRLVKWLIAFGWGSPAIVIFVYSMARGLGGTPEDNRHCWMNQTNY 294
            |:|.||.|||:::..||.|||:.:.....||||.||:.:.|:...|....    |..||...:.:
  Rat   416 WILVEGLYLHSLIFMAFFSEKKYLWGFTIFGWGLPAVFVAVWVGVRATLA----NTGCWDLSSGH 476

  Fly   295 QN-ILMVPVCISMFLNLLFLCNIVRVVLLKL---NAPASIQGSCGPSRTVLQAFRATLLLVPLLG 355
            :. |:.||:..|:.||.:...||:||:..||   ||     |.|...:...:..|:||:||||.|
  Rat   477 KKWIIQVPILASVVLNFILFINIIRVLATKLRETNA-----GRCDTRQQYRKLLRSTLVLVPLFG 536

  Fly   356 LQY---ILTPFRPAPKHPW--ENTYEIISAFTASFQGLCVAILFCFCNGEVIAQMKRKWR----M 411
            :.|   :..|:.......|  :..||::  |. ||||..|||::|||||||.|::::.|.    .
  Rat   537 VHYTVFMALPYTEVSGTLWQIQMHYEML--FN-SFQGFFVAIIYCFCNGEVQAEIRKSWSRWTLA 598

  Fly   412 MCFSNRPRTNS--------YTATQVSFV--RCGPPLPGEEKVXLKDMSAKRRASAGPQHHQPHHQ 466
            :.|..:.|:.|        .:.|.|:.|  |.|..||...::   ..:.....|..|.|.:|...
  Rat   599 LDFKRKARSGSSSYSYGPMVSHTSVTNVGPRAGLSLPLSPRL---PPATTNGHSQLPGHAKPGAP 660

  Fly   467 SHQLSTDQQRARSQSLASSSSFLEGWRDRMPFLKRRQTIDHSRQSQPLMEEGGETV 522
            :.:..|   ...:.::.....||.|....:.     :....|.:..||::|..|||
  Rat   661 ATETET---LPVTMAVPKDDGFLNGSCSGLD-----EEASGSARPPPLLQEEWETV 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:397086 24/66 (36%)
7tmB1_NPR_B4_insect-like 139..411 CDD:320388 102/314 (32%)
TM helix 1 141..166 CDD:320388 8/24 (33%)
TM helix 2 175..197 CDD:320388 9/27 (33%)
TM helix 3 214..241 CDD:320388 14/44 (32%)
TM helix 4 253..273 CDD:320388 7/19 (37%)
TM helix 5 291..320 CDD:320388 9/29 (31%)
TM helix 6 339..366 CDD:320388 10/29 (34%)
TM helix 7 373..398 CDD:320388 12/24 (50%)
Pth1rXP_038937952.2 None

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