DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh31-R and calcrlb

DIOPT Version :9

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_001920035.3 Gene:calcrlb / 567131 ZFINID:ZDB-GENE-080924-1 Length:466 Species:Danio rerio


Alignment Length:386 Identity:151/386 - (39%)
Similarity:223/386 - (57%) Gaps:33/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARYAHKECGLDGEWFKHPLTNKTWSNYTT 129
            |:.|..|:||||||.....|.::.:.||::...||.:..|.|.|...|.||.||.:|:||||||.
Zfish    67 GSMCKRTWDGWLCWEYMEPGVTSAQHCPNYFDDFDTSEVATKICTNSGHWFVHPESNRTWSNYTD 131

  Fly   130 CVNLEDLNWRHTVNL--ISEVGYGTSLLAILLSLAILGYFKSLKCARITLHMNLFASFAANNSLW 192
            |....:.:.:..:||  ::.:|:|.||:::..||.|..|||||.|.|||||.|||.||..|:.:.
Zfish   132 CRLKSNDHKKTALNLYYLTLIGHGLSLISLFTSLGIFFYFKSLSCQRITLHKNLFFSFVLNSVIT 196

  Fly   193 LVWYLLVMPNSELLHQSPMRC---VALHITLHYFLLSNYSWMLCEGFYLHTVLVAAFISEKRLVK 254
            ::::..|..|.|:...:|:.|   |.:|   ||.|..||.||||||.||||::|.|..:||:.:.
Zfish   197 IIFFTCVANNQEVTEANPVSCKVSVFIH---HYLLGCNYFWMLCEGIYLHTLIVVAVFAEKQHLM 258

  Fly   255 WLIAFGWGSPAIVIFVYSMARGLGGTPEDNRHCWM-NQTNYQNILMVPVCISMFLNLLFLCNIVR 318
            |....|||.|.|..|:::::|..    ..|.:||: :.|:...|:..|:|.::.:||.||.||||
Zfish   259 WYYLLGWGFPLIPAFIHAISRSY----YYNDNCWISSNTSLLYIIHGPICAALLVNLFFLLNIVR 319

  Fly   319 VVLLKLNAPASIQGSCGPSRTVLQAFRATLLLVPLLGLQYILTPFRPAPKHPWE---NTYEIISA 380
            |::.||......:.|     ..::|.||||:||||||:||:|.|::|..:...|   :|..|:  
Zfish   320 VLITKLKVTHQAESS-----VYMRAVRATLILVPLLGIQYLLLPYKPDGRLASEIFIHTTNIL-- 377

  Fly   381 FTASFQGLCVAILFCFCNGEVIAQMKRKWRMM------CFSNRP-RTNSYTATQVSFV-RC 433
              ..:|||.||.:|||.|.||...::|.|...      .|:|.. |:.||||:.::.| ||
Zfish   378 --MHYQGLLVATIFCFFNSEVQGVLRRHWNQYRTQFGGTFANTALRSASYTASSMTEVHRC 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:280888 30/66 (45%)
7tm_4 140..390 CDD:304433 101/258 (39%)
calcrlbXP_001920035.3 HRM 67..132 CDD:280888 29/64 (45%)
7tm_2 143..385 CDD:278432 101/257 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 185 1.000 Domainoid score I3304
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21179
Inparanoid 1 1.050 287 1.000 Inparanoid score I2818
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1005634at2759
OrthoFinder 1 1.000 - - FOG0001436
OrthoInspector 1 1.000 - - mtm6498
orthoMCL 1 0.900 - - OOG6_105420
Panther 1 1.100 - - O PTHR45620
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.970

Return to query results.
Submit another query.