DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh31-R and gcgrb

DIOPT Version :9

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_009293538.1 Gene:gcgrb / 565237 ZFINID:ZDB-GENE-050516-2 Length:509 Species:Danio rerio


Alignment Length:517 Identity:140/517 - (27%)
Similarity:211/517 - (40%) Gaps:120/517 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 AGTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARY--AHKECGLDGEWFKHPLTNKTWSN 126
            ||..|..|||.::||||...||:....||.::..:....:  .::.||.||.|..       ..|
Zfish    49 AGLVCNRTFDQYVCWPDGLPGTTVNVSCPWYLPWYSKVDHGLVYRVCGADGRWVH-------GKN 106

  Fly   127 YTTCVNLEDLNWRHTVNLISE------VGYGTSLLAILLSLAILGYFKSLKCARITLHMNLFASF 185
            .:.| ..:|...:....::|:      |||..||.|:.|:|.||..|:.|.|.|..:|||||.||
Zfish   107 TSEC-EQDDPGQKQYGQILSKFRAMYTVGYSLSLAALTLALGILVSFRKLHCMRNNIHMNLFGSF 170

  Fly   186 AANNSLWLVWYLLVMPNSELLH--------------------QSPMRCVALHITLHYFLLSNYSW 230
                   :|..|.::....||.                    |:.:.|.:..:.:.|.:::|..|
Zfish   171 -------MVRALSILIKDTLLDQMNRARSGPSHYQSTRWLDTQTVVGCRSAMVMMQYSVMANNCW 228

  Fly   231 MLCEGFYLHTVLVAAFISEKRLVKWLIAFGWGSPAIVIFVYSMARGLGGTPEDNRHCWMNQTN-- 293
            :|.||.|||::||....||:......:..|||:|.|.:..:...:.|    .:|..||....|  
Zfish   229 LLVEGLYLHSLLVTTVFSERNYFCIYLCIGWGAPLIFVLPWMTVKYL----YENEECWERNMNMG 289

  Fly   294 YQNILMVPVCISMFLNLLFLCNIVRVVLLKLNAPASIQGSCGPSRTVLQAFR---ATLLLVPLLG 355
            |..|:..|:..:..:|.:....|:::::.||.|        ...|.....||   :||.|:||||
Zfish   290 YWWIIRSPILFAYLINFIIFIRIIKILMSKLKA--------HQMRYTDYKFRLAKSTLTLIPLLG 346

  Fly   356 LQYILTPFRPAPKHPWENTYEIISAF----TASFQGLCVAILFCFCNGEVIAQMKRKWRMM---- 412
            :..:|..|......|.|:...:|..|    .:|||||.||||:||.|.||.::|.:||:..    
Zfish   347 IHAVLFTFVIDESVPKESLLRLIRLFYDLLFSSFQGLLVAILYCFVNKEVQSEMLKKWKRWKLGK 411

  Fly   413 --------CFSNRPRTNSYTATQVSFVRCGPPLPGEEKVXLKDMSAKRRASAGPQHHQPHHQSHQ 469
                    ..|..|...|.||         ||...:    ..|.|:..             :|.:
Zfish   412 DIDEEYRHTHSQTPHAKSSTA---------PPAAHD----CPDTSSSL-------------ESQR 450

  Fly   470 LSTDQQRARSQSLASSSSFLEGWRDRMPFLKRRQ---------TIDHSRQSQPLMEEGGETV 522
            |.|..|...|:|..         |.|:.|..:.|         |.|...:.:||..||...|
Zfish   451 LVTGLQNGLSRSRG---------RARLQFTSQTQEGASNCSSLTEDICLEERPLNNEGSAAV 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:280888 20/68 (29%)
7tm_4 140..390 CDD:304433 80/284 (28%)
gcgrbXP_009293538.1 HRM 50..113 CDD:280888 20/70 (29%)
7tm_2 124..385 CDD:278432 80/279 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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