DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh31-R and gcgra

DIOPT Version :9

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_009298002.1 Gene:gcgra / 562973 ZFINID:ZDB-GENE-050516-1 Length:520 Species:Danio rerio


Alignment Length:444 Identity:129/444 - (29%)
Similarity:202/444 - (45%) Gaps:83/444 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARY--AHKECGLDGEWFKHPLTNKTWSNY 127
            |..|..|||.:.||||....|:....||.::......|:  .|.||..||::.|.       .:.
Zfish    51 GVVCNRTFDRYACWPDALPNTTVSVACPWYLPWHKEVRHGLVHVECDADGQYSKQ-------KDA 108

  Fly   128 TTCVNLEDLNWRHTVNLISE------VGYGTSLLAILLSLAILGYFKSLKCARITLHMNLFASFA 186
            :.|::.:  |.:|...::.:      |||..||.|::|:|:||..|:.|.|.|..:||||||||.
Zfish   109 SECLSRD--NIQHYGRILRQFRTMYTVGYSLSLGALVLALSILVAFRKLHCMRNNIHMNLFASFI 171

  Fly   187 ANNSLWLVWYLL-----VMP-----NSEL------LHQSPMRCVALHITLHYFLLSNYSWMLCEG 235
            ...|..|:...|     ..|     .:||      .:::.:.|....:.:.|.:|:|..|:|.||
Zfish   172 LRASSILIKDALSERPDTFPVGQDITTELEVEWLVKNETAVGCRVAVVMMQYSILANSYWLLVEG 236

  Fly   236 FYLHTVLVAAFISEKRLVKWLIAFGWGSPAIVIFVYSMARGLGGTPEDNRHCW--MNQTNYQNIL 298
            .|||::||...::|:..:...::.|||:|.|.:..:.:.:.|    .:|..||  .|...|..|:
Zfish   237 IYLHSLLVVTVLTERNYLSIYLSIGWGAPLIFVLPWVIVKYL----YENEECWEQNNHMEYWWII 297

  Fly   299 MVPVCISMFLNLLFLCNIVRVVLLKLNAPASIQGSCGPSRTVLQAFRATLLLVPLLGLQYILTPF 363
            ..|:.:::.:|.....:|:::::.||.|     .....|....:..::||.|:||||:..:|..|
Zfish   298 RSPILLAVLINFFIFIHIIKILVSKLRA-----HQMRYSDYKFRLAKSTLTLIPLLGIHSVLFSF 357

  Fly   364 --RPAPKH---PWENTYEIISAFTASFQGLCVAILFCFCNGEVIAQMKRKWR------------- 410
              ..:..|   |...|...|..|..|||||.||||:||.|.||.:::.:|||             
Zfish   358 VTDESTSHGALPLRLTKLFIDLFFNSFQGLLVAILYCFVNKEVQSEILKKWRRWKLGRDIEEEYR 422

  Fly   411 ---------------MMCFSNRPRTNSYTATQVSFVRCGPPLPGEEKVXLKDMS 449
                           |:..:|.||... .||..|  |.|.|   |||..|...|
Zfish   423 HTYSQSLQIQKSGSIMVHPTNLPRLPD-IATTTS--RLGSP---EEKQMLVSSS 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:280888 20/68 (29%)
7tm_4 140..390 CDD:304433 81/278 (29%)
gcgraXP_009298002.1 HRM 51..113 CDD:308439 20/68 (29%)
7tm_GPCRs 124..410 CDD:333717 91/294 (31%)
TM helix 1 127..151 CDD:320095 10/23 (43%)
TM helix 2 160..181 CDD:320095 10/20 (50%)
TM helix 3 215..237 CDD:320095 6/21 (29%)
TM helix 4 256..272 CDD:320095 5/15 (33%)
TM helix 5 290..313 CDD:320095 4/22 (18%)
TM helix 6 335..360 CDD:320095 9/24 (38%)
TM helix 7 372..397 CDD:320095 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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