DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh31-R and Calcrl

DIOPT Version :10

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_061252.2 Gene:Calcrl / 54598 MGIID:1926944 Length:463 Species:Mus musculus


Alignment Length:405 Identity:156/405 - (38%)
Similarity:230/405 - (56%) Gaps:34/405 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARYAHKECGLDGEWFKHPLTNKTWSNYTT 129
            |.:|..|:||||||.|.|.||.:.:.|||:...|||:....|.|..||.||:||.:|:||:|||.
Mouse    61 GLYCNRTWDGWLCWNDVAAGTESMQYCPDYFQDFDPSEKVTKICDQDGHWFRHPDSNRTWTNYTL 125

  Fly   130 CVNLEDLNWRHTVNL--ISEVGYGTSLLAILLSLAILGYFKSLKCARITLHMNLFASFAANNSLW 192
            |.|......:..:||  ::.:|:|.|:.::::||.|..|||||.|.|||||.|||.||..|:.:.
Mouse   126 CNNSTHEKVKTALNLFYLTIIGHGLSIASLIISLIIFFYFKSLSCQRITLHKNLFFSFICNSIVT 190

  Fly   193 LVWYLLVMPNSELLHQSPMRCVALHITLHYFLLS-NYSWMLCEGFYLHTVLVAAFISEKRLVKWL 256
            ::....|..|..|:..:|:.|..... :|.:|:. ||.||||||.||||::|.|..:||:.:.|.
Mouse   191 IIHLTAVANNQALVATNPVSCKVSQF-IHLYLMGCNYFWMLCEGVYLHTLIVVAVFAEKQHLMWY 254

  Fly   257 IAFGWGSPAIVIFVYSMARGLGGTPEDNRHCWM-NQTNYQNILMVPVCISMFLNLLFLCNIVRVV 320
            ...|||.|.:...::::||.|    ..|.:||: :.|:...|:..|:|.::.:||.||.|||||:
Mouse   255 YFLGWGFPLLPACIHAIARSL----YYNDNCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVL 315

  Fly   321 LLKLNAPASIQGSCGPSRTVLQAFRATLLLVPLLGLQYILTPFRPAPKHPWENTYEIISAFTASF 385
            :.||.....::     |...::|.||||:||||||::::|.|:||..|.. |..|:.:......|
Mouse   316 ITKLKVTHQVE-----SNLYMKAVRATLILVPLLGIEFVLFPWRPEGKVA-EEVYDYVMHILMHF 374

  Fly   386 QGLCVAILFCFCNGEVIAQMKRKWRM--------MCFSNRPRTNSYTATQVSFVR-----C---- 433
            |||.||.:|||.||||.|.::|.|..        ...|:..|:.|||.:.:|.::     |    
Mouse   375 QGLLVATIFCFFNGEVQAILRRNWNQYKIQFGNGFSHSDALRSASYTVSTISDMQGYSHDCPTEH 439

  Fly   434 --GPPLPGEEKVXLK 446
              |..:...|.|.||
Mouse   440 LNGKSIQDIENVALK 454

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:397086 34/66 (52%)
7tmB1_NPR_B4_insect-like 139..411 CDD:320388 109/275 (40%)
TM helix 1 141..166 CDD:320388 8/26 (31%)
TM helix 2 175..197 CDD:320388 10/21 (48%)
TM helix 3 214..241 CDD:320388 13/27 (48%)
TM helix 4 253..273 CDD:320388 5/19 (26%)
TM helix 5 291..320 CDD:320388 12/28 (43%)
TM helix 6 339..366 CDD:320388 14/26 (54%)
TM helix 7 373..398 CDD:320388 10/24 (42%)
CalcrlNP_061252.2 HRM 61..128 CDD:397086 34/66 (52%)
7tmB1_calcitonin_R 137..410 CDD:341343 109/283 (39%)
TM helix 1 139..164 CDD:341343 8/24 (33%)
TM helix 2 173..195 CDD:341343 10/21 (48%)
TM helix 3 212..239 CDD:341343 13/27 (48%)
TM helix 4 251..271 CDD:341343 5/19 (26%)
TM helix 5 286..315 CDD:341343 12/28 (43%)