DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh31-R and ghrhra

DIOPT Version :10

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001124524.1 Gene:ghrhra / 541314 ZFINID:ZDB-GENE-050315-2 Length:432 Species:Danio rerio


Alignment Length:388 Identity:112/388 - (28%)
Similarity:180/388 - (46%) Gaps:51/388 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 THCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPAR-YAHKECGLDGEWFKHPLTNKTWSN--- 126
            |.|...:||..||.....|......|.|........: :.::.|..:|           |::   
Zfish    51 TGCGTDWDGIRCWHTANTGQLINVSCSDVFQHISNTQGFIYRNCVSNG-----------WTDPYP 104

  Fly   127 -YTTCVNLED-------LNWRHTVNLISEVGYGTSLLAILLSLAILGYFKSLKCARITLHMNLFA 183
             |......||       ..:..|:..:...||.|||::::.::.|...|:...|.|..:|:|||.
Zfish   105 PYEEACAFEDDSESGTVTTYLSTLKQLYTAGYATSLISLITAVIIFTCFRKFHCTRNYIHINLFV 169

  Fly   184 SFAANNSLWLVWYLLVMPNSELLH--QSPMRCVALHITLHYFLLSNYSWMLCEGFYLHTVLVAAF 246
            ||....|...:...::..:....|  .|.:.|.:......:.:|:||.|:|.||.||.|:|...|
Zfish   170 SFILRASAVFIKGTVLFSDETQDHCLMSTVLCKSAVTFFQFCILTNYFWLLVEGLYLQTLLALTF 234

  Fly   247 ISEKRLVKWLIAFGWGSPAIVIFVYSMARGLGGTPEDNRHCW--MNQTNYQNILMVPVCISMFLN 309
            :|:::...|.|..|||.|::|:.|:.:.|..    .|||.||  .:.||...|:..|:..|:|.|
Zfish   235 VSQRKYFWWYILIGWGVPSVVLVVWVLTRQF----YDNRGCWDDTDNTNIWWIIKGPITASLFTN 295

  Fly   310 LLFLCNIVRVVLLKLNAPASIQGSCGPSRT--VLQAFRATLLLVPLLGLQYILTPFRPAPKHPWE 372
            ::...|::|:::.||.:|     ..|.:.|  .::..::||.|:||.|:.|.|..|.|      |
Zfish   296 IIIFLNVIRILVQKLKSP-----GVGGNDTGHFMRLAKSTLFLIPLFGMHYTLFAFLP------E 349

  Fly   373 NTYEIISAF----TASFQGLCVAILFCFCNGEVIAQMKRK---WRMMCFSNRPRTNSYTATQV 428
            ||.|||..:    ..||||..||:|:||.||||.|::||:   |......:..:....|.||:
Zfish   350 NTGEIIRFYIELGLGSFQGFVVALLYCFLNGEVQAELKRRLWTWLTQTHLSPCKKRRVTVTQI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:397086 13/70 (19%)
7tmB1_NPR_B4_insect-like 139..411 CDD:320388 94/284 (33%)
TM helix 1 141..166 CDD:320388 7/24 (29%)
TM helix 2 175..197 CDD:320388 7/21 (33%)
TM helix 3 214..241 CDD:320388 9/26 (35%)
TM helix 4 253..273 CDD:320388 8/19 (42%)
TM helix 5 291..320 CDD:320388 9/28 (32%)
TM helix 6 339..366 CDD:320388 10/28 (36%)
TM helix 7 373..398 CDD:320388 14/28 (50%)
ghrhraNP_001124524.1 HRM 52..113 CDD:397086 12/71 (17%)
7tmB1_GHRHR2 125..392 CDD:320399 93/281 (33%)
TM helix 1 127..152 CDD:320399 7/24 (29%)
TM helix 2 161..183 CDD:320399 7/21 (33%)
TM helix 3 202..229 CDD:320399 9/26 (35%)
TM helix 4 241..261 CDD:320399 8/19 (42%)
TM helix 5 277..306 CDD:320399 9/28 (32%)
TM helix 6 322..349 CDD:320399 10/32 (31%)
TM helix 7 354..379 CDD:320399 11/24 (46%)

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