DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh31-R and pth1r

DIOPT Version :9

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_571432.1 Gene:pth1r / 30629 ZFINID:ZDB-GENE-991123-8 Length:536 Species:Danio rerio


Alignment Length:514 Identity:147/514 - (28%)
Similarity:237/514 - (46%) Gaps:102/514 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 FDALRAACETRLNASGQLA-GSGGPGAEAGTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDP 100
            |:|.| .||..:.:..:.: ||          |...:||.||||:...|......||::|..|:.
Zfish    42 FNAKR-KCERAIKSKHKTSEGS----------CLPEWDGILCWPEGVPGKMVSTSCPEYIYDFNH 95

  Fly   101 ARYAHKECGLDGEWFKHPLTNKTWSNYTTCVNL-------EDLNWRHTVNLISEVGYGTSLLAIL 158
            ..:|::.|.|:|.|......||||:||:.|...       ::......:.||..|||..||.:::
Zfish    96 KGHAYRRCDLNGTWELASHNNKTWANYSECAKFFPHYNQNQEREVFDRLYLIYTVGYSISLGSLM 160

  Fly   159 LSLAILGYFKSLKCARITLHMNLFASFAANNSLWLVWYLLVMPNSEL-------------LHQSP 210
            ::..|||||:.|.|.|..:||:||.||........|..:::...|.|             :.::|
Zfish   161 VATVILGYFRRLHCTRNYIHMHLFLSFMLRAISIFVKDVVLYSGSALQEMERITVEDLKSITEAP 225

  Fly   211 -------MRC-VALHITLHYFLLSNYSWMLCEGFYLHTVLVAAFISEKRLVKWLIAFGWGSPAIV 267
                   :.| ||:.:.| |||.:||.|:|.||.|||:::...|.|:::.:......|||.||:.
Zfish   226 PANKTQFIGCKVAVTLFL-YFLATNYYWILVEGLYLHSLIFMTFFSDRKYLWGFTLIGWGVPAMF 289

  Fly   268 IFVYSMARGLGGTPEDNRHCW-MNQTNYQNILMVPVCISMFLNLLFLCNIVRVVLLKL---NAPA 328
            :.:::..|......|    || ::..|.:.|:.:|:..::.:|.|...||:||:..||   ||  
Zfish   290 VTIWASVRATLADTE----CWDLSAGNLKWIVQIPILTAIVVNFLLFLNIIRVLATKLRETNA-- 348

  Fly   329 SIQGSCGPSRTVLQAFRATLLLVPLLGLQYIL---TPFRPAPKHPW--ENTYEIISAFTASFQGL 388
               |.|...:...:..::||:|:||.|:.||:   .|:.......|  :..||::  |. |.||.
Zfish   349 ---GRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMPYTEVSGVLWQIQMHYEML--FN-SVQGF 407

  Fly   389 CVAILFCFCNGEVIAQMKRKWR----MMCFSNRPRTNSYT--------ATQVSFVRCGPP----- 436
            .|||::|||||||.|::|:.|.    .:.|..:.|:.|.|        .|.|:.|....|     
Zfish   408 FVAIIYCFCNGEVQAEIKKAWNRRTLALDFKRKARSGSNTYSYGPMVSHTSVTNVTARGPLALHL 472

  Fly   437 --------------LPGEEKVXLKDMSAKRRA--SAGPQHHQPHHQSHQLSTDQQRARS 479
                          |||    .:|:.|....:  |:|   |:.|.|..:.|...|..::
Zfish   473 TNRLGHVTTNGHRNLPG----YIKNGSVSENSIPSSG---HELHIQEEEPSKTFQMEKT 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:280888 24/66 (36%)
7tm_4 140..390 CDD:304433 83/279 (30%)
pth1rNP_571432.1 HRM 60..125 CDD:280888 25/74 (34%)
7tm_2 141..409 CDD:278432 83/280 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.