DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dh31-R and Vipr1

DIOPT Version :10

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_036817.1 Gene:Vipr1 / 24875 RGDID:3961 Length:459 Species:Rattus norvegicus


Alignment Length:430 Identity:126/430 - (29%)
Similarity:208/430 - (48%) Gaps:79/430 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 THCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARYAHKECGLDGEWFKHPLTNKTWSN---- 126
            |.|:..:|...|||.|..|.:....||.....|.|         :.|.......|.:.||.    
  Rat    61 TGCSKMWDNLTCWPTTPRGQAVVLDCPLIFQLFAP---------IHGYNISRSCTEEGWSQLEPG 116

  Fly   127 -YTTCVNLED----------LNWRHTVNLISEVGYGTSLLAILLSLAILGYFKSLKCARITLHMN 180
             |.....|.|          ..:.:||.....:||..||.::|:::|||..|:.|.|.|..:||:
  Rat   117 PYHIACGLNDRASS
LDEQQQTKFYNTVKTGYTIGYSLSLASLLVAMAILSLFRKLHCTRNYIHMH 181

  Fly   181 LFASFAANNSLWLVWYLLVMPNSELLH--QSPMRCVALHITLHYFLLSNYSWMLCEGFYLHTVLV 243
            ||.||....:...:..:.:..:.|:.|  ::.:.|.|..:...|.:::|:.|:|.||.||:|:|.
  Rat   182 LFMSFILRATAVFIKDMALFNSGEIDHCSEASVGCKAAVVFFQYCVMANFFWLLVEGLYLYTLLA 246

  Fly   244 AAFISEKRLVKWLIAFGWGSPAIVIFVYSMAR----GLGGTPEDNRHCW---MNQTNYQNILMVP 301
            .:|.||::.....|..|||.|::.|.::::.|    ..|        ||   :|.:.:. |:..|
  Rat   247 VSFFSERKYFWGYILIGWGVPSVFITIWTVVRIYFEDFG--------CWDTIINSSLWW-IIKAP 302

  Fly   302 VCISMFLN-LLFLCNIVRVVLLKLNAPASIQGSCGP-SRTVLQAFRATLLLVPLLGLQYILTPFR 364
            :.:|:.:| :||:| |:|:::.||..|...:....| ||..    ::||||:||.|:.|::..|.
  Rat   303 ILLSILVNFVLFIC-IIRILVQKLRPPDIGKNDSSPYSRLA----KSTLLLIPLFGIHYVMFAFF 362

  Fly   365 PAP-KHPWENTYEIISAFTASFQGLCVAILFCFCNGEVIAQMKRKWR------MMCFSNRPR--- 419
            |.. |...:..:|::   ..||||..||||:||.||||.|:::||||      ::.:|::.:   
  Rat   363 PDNFKAQVKMVFELV---VGSFQGFVVAILYCFLNGEVQAELRRKWRRWHLQGVLGWSSKSQHPW 424

  Fly   420 --TNSYT-ATQVSFV-RCGPPLPGEEKVXLKDMSAKRRAS 455
              :|..| :||||.: |..|             ||:|.:|
  Rat   425 GGSNGATCSTQVSMLTRVSP-------------SARRSSS 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:397086 17/70 (24%)
7tmB1_NPR_B4_insect-like 139..411 CDD:320388 94/289 (33%)
TM helix 1 141..166 CDD:320388 10/24 (42%)
TM helix 2 175..197 CDD:320388 6/21 (29%)
TM helix 3 214..241 CDD:320388 9/26 (35%)
TM helix 4 253..273 CDD:320388 6/19 (32%)
TM helix 5 291..320 CDD:320388 9/29 (31%)
TM helix 6 339..366 CDD:320388 9/26 (35%)
TM helix 7 373..398 CDD:320388 11/24 (46%)
Vipr1NP_036817.1 HormR 59..130 CDD:214468 19/77 (25%)
7tmB1_VIP-R1 140..407 CDD:320397 93/283 (33%)
TM helix 1 142..167 CDD:320397 10/24 (42%)
TM helix 2 176..198 CDD:320397 6/21 (29%)
TM helix 3 217..244 CDD:320397 9/26 (35%)
TM helix 4 256..276 CDD:320397 6/19 (32%)
TM helix 5 292..321 CDD:320397 10/30 (33%)
TM helix 6 337..364 CDD:320397 12/30 (40%)
TM helix 7 369..394 CDD:320397 11/27 (41%)

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